Transcript Information: R_Transcript_187023.p1


Annotated TAIR IDAT1G71760.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:26989414-26990499 | Forward length=276
E-Value9.2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71580239038113
Replicate 20.89199969088848
Replicate 31.1977379135243
Condition 2: 8 Hour
Replicate 10.56013416545986
Replicate 20.58459821807021
Replicate 30.94910382328821
Condition 3: 24 Hour
Replicate 11.1253827072404
Replicate 20.72076009446331
Replicate 31.2159835937165


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187023.p1 GENE.R_Transcript_187023~~R_Transcript_187023.p1 ORF type:complete len:306 (+),score=78.09,UPF0544|PF15749.1|5.5e-21,UPF0544|PF15749.1|38 R_Transcript_187023:292-1209(+)
ATGTCGAAATCTATCCTCTTCATTGCACTCCAATGTTGTGAATGCTCCACCATGCAGGTGAAGCAACAGAAGAAAAGAAGCAACAAATGGGTATGTGCAGTATGCAACCAGAAGCAATCTATGATAAAAGTCTACGCTCAGAGCTACCAAGCGAAGGACATTCGCCAATTCGTACAGTCCTTCAACATGTCCCGCAAGGTGTCTGATGAGAAAGGTGGTCTTTATGATGAAGGTTCTTCTCTTGGGCATTTCGACGAACAGTTGGAAGGCGATGTGGAGGTGGGGGAGTTTCAAGAGACGAAGGTGACGGGTAAAAGCCGAACTGATTGGAGCGAGTACATTGAGGATGAGCAGCATGATGGGTATCCTGATTACTTGAAATCAGTTCCAAAAGAAGCTGGGTTGTTTGAGCCAGAAGTTGTGACTGAATTGCCTGGTGAAGGGTTGTTCAAGAAGCCCAAATTGAAGGGTAATAATGAGGTTTACAAGCCTAACTTTTTGAAGCTAAGTACTTATAAGAAAACCCACAATGCACAAGTTGAAACTGCAACAAGGAAGATCATAGAGAATGTGAAAACTCGACCAAGCTATTTGAGTGTGGAACAGGTGTGGGATGAACAGACAGAAAATGACAGTCTCCTGCATAGAAACACGAGGAAGGCGAAAGGGGTTGAAGAACATGATCTGTTGGGAAATGCAAGGAGGAGCTGGAATCAGGAGCAGATTCAGAAACAACAAGTGACAGCGGCAAAGCAAGGCGCCTCTAAATGGAGCGAATACTTGACTGAGGATGAAGCCGAGTGTATTCAAGGAGAGAGCTCAGCTTTTACTGATGATCTGAAGCTAATGTGTAAATATGATCTGGAGAGTAATGGTGAAGAAAGAGTAGAAGATGACATCCACCCTGATTTCATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187023.p1 GENE.R_Transcript_187023~~R_Transcript_187023.p1 ORF type:complete len:306 (+),score=78.09,UPF0544|PF15749.1|5.5e-21,UPF0544|PF15749.1|38 R_Transcript_187023:292-1209(+)
MSKSILFIALQCCECSTMQVKQQKKRSNKWVCAVCNQKQSMIKVYAQSYQAKDIRQFVQSFNMSRKVSDEKGGLYDEGSSLGHFDEQLEGDVEVGEFQETKVTGKSRTDWSEYIEDEQHDGYPDYLKSVPKEAGLFEPEVVTELPGEGLFKKPKLKGNNEVYKPNFLKLSTYKKTHNAQVETATRKIIENVKTRPSYLSVEQVWDEQTENDSLLHRNTRKAKGVEEHDLLGNARRSWNQEQIQKQQVTAAKQGASKWSEYLTEDEAECIQGESSAFTDDLKLMCKYDLESNGEERVEDDIHPDFM*

Click here to download the sequence:
Link to NCBI Protein BLAST