Transcript Information: R_Transcript_187097.p1


Annotated TAIR IDAT1G62780.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23249349-23251066 | Reverse length=237
E-Value5.3E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9040858549886
Replicate 21.2839464283348
Replicate 30.98878004012169
Condition 2: 8 Hour
Replicate 10.44039325444686
Replicate 20.80434826766855
Replicate 31.044697014123
Condition 3: 24 Hour
Replicate 10.90840244426167
Replicate 20.55534824544619
Replicate 30.47239650403375


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187097.p1 GENE.R_Transcript_187097~~R_Transcript_187097.p1 ORF type:complete len:278 (+),score=46.69 R_Transcript_187097:143-976(+)
ATGGCCGCTCTAAGCATTGGGATTGCTAACTTACGCCCTTTAACCCCCTCCCTCTCTTTCAGAACCCCACCAAGACCCAGAATTTCATGCGTTTGGGTAATTCCTCTTTATCTTTCTCTCTCTATTTCTCTAAAACCATTTCCTTTTTTTTTTTTTAAACTATTAGCAGTTGAGTGTTGTTGTCTGGGTGTAATTTGGAATATGGAAAGGAAGGACCCGGAAGGGATATTCAGAACACCACCGCAAACAGGGCACATAGCAAGGCTAGAGTTCAGGAGAAGAATGGAGAAAGACAGTGAGGCTAGAGAAGCTTATGAACGCCAGTTACGGGAAGAGAAAGAACGCCGTGAGGCTCTTCGTCAGTCACGGGTTATTCCGGATACAGCAGTAGAGTTGATAGAGTATTTTCTTGACACTGAGGCTCAGGAGATTGAATTTGAGATTGCTCGGTTGAGACCCAGATTAAATGAAGAATTTTTCAAACAACTGCAATCCGAATTAGGACAGCTCCGATTTGCAGTGTCAAAAACTCAGGAAATGGAGGACAGATTGATCGAGCTTGAGGCACTGCAAAAGGCCTTGTTAGAAGGAACAGAAGCATATGATAAAATGCAGAATGAACTTATAAACGCAAAGCAAAATCTGGTCAAGATCTTTACCTCAAAGGATATCAATGCAACTTTGCTTGAGATGGTTGAGCAGAACGAGGTGAATAGATCCCTACTGACACTTCTTGATGAGAATATAGCAAGTGCACATCGGAGTAACCAGAAGGAAGCTGCGGAATACATGGAGAAGCTCCGTGTGGCTGTTCTTAGATACGTGACAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187097.p1 GENE.R_Transcript_187097~~R_Transcript_187097.p1 ORF type:complete len:278 (+),score=46.69 R_Transcript_187097:143-976(+)
MAALSIGIANLRPLTPSLSFRTPPRPRISCVWVIPLYLSLSISLKPFPFFFFKLLAVECCCLGVIWNMERKDPEGIFRTPPQTGHIARLEFRRRMEKDSEAREAYERQLREEKERREALRQSRVIPDTAVELIEYFLDTEAQEIEFEIARLRPRLNEEFFKQLQSELGQLRFAVSKTQEMEDRLIELEALQKALLEGTEAYDKMQNELINAKQNLVKIFTSKDINATLLEMVEQNEVNRSLLTLLDENIASAHRSNQKEAAEYMEKLRVAVLRYVTV*

Click here to download the sequence:
Link to NCBI Protein BLAST