Transcript Information: R_Transcript_187196.p1


Annotated TAIR IDAT5G16640.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5461031-5462545 | Forward length=504
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.69140003616359
Replicate 20.15906288194165
Replicate 30.17353589087994
Condition 2: 8 Hour
Replicate 10.18549897687307
Replicate 20.33880124001796
Replicate 30.2750244033392
Condition 3: 24 Hour
Replicate 11.2174594741964
Replicate 20.16708529462559
Replicate 30.49744783379312


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187196.p1 GENE.R_Transcript_187196~~R_Transcript_187196.p1 ORF type:complete len:132 (+),score=18.10 R_Transcript_187196:265-660(+)
ATGAAGAATTCCTTGAAAGCTTCAATTGCAATTGCCTCCCATCAATTTCATGTCTCTTATTACGGTAACTTTCCCATCTTGTTTCAGATTTCTACTAGTAGCATTAATGGTTCTCATTGCTTTCCCTGTTTTCTTATTTCTCCTTCTTTATATTATTCTTCTACTGCTAATGCTAATGCTACCACAAGAAGAAGACCCCATCACCCTGAATTGTTCTTGAATTCTGTGAGGGAGCAATGCAAGCTAGGATTTAAGGACCTTGATTATCCAGTTGTTCTTTTCAATCAAATGACCTCTTTGCGTCCCCTTCCTTCCATTGTTGATTTCACTCGCCTCTTGTCCTCCATTCTTAAGATCAAGAAACCCCAAATGAAGTTGATAAATACCACCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187196.p1 GENE.R_Transcript_187196~~R_Transcript_187196.p1 ORF type:complete len:132 (+),score=18.10 R_Transcript_187196:265-660(+)
MKNSLKASIAIASHQFHVSYYGNFPILFQISTSSINGSHCFPCFLISPSLYYSSTANANATTRRRPHHPELFLNSVREQCKLGFKDLDYPVVLFNQMTSLRPLPSIVDFTRLLSSILKIKKPQMKLINTTL*

Click here to download the sequence:
Link to NCBI Protein BLAST