Transcript Information: R_Transcript_187199.p1


Annotated TAIR IDAT1G12300.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4184163-4186076 | Reverse length=637
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87966076890211
Replicate 20.12648373744758
Replicate 30.68996197578772
Condition 2: 8 Hour
Replicate 10.44251563157672
Replicate 20.13470410747702
Replicate 30.32804115579013
Condition 3: 24 Hour
Replicate 10.82980026124232
Replicate 20.53145202145969
Replicate 30.52741457076861


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187199.p1 GENE.R_Transcript_187199~~R_Transcript_187199.p1 ORF type:3prime_partial len:166 (+),score=21.92,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|7.9e-09,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|1.4e-05 R_Transcript_187199:193-687(+)
ATGGCAAGGCATAGGAAAGCTTCTTCTTGTCTTTTTGGTAACTTTCTCTCTCCTCTTCTCAATTCTATTTCTCATTATCCCTGGTTTCACTTTCAATTTCAATTTCATTCAACTACGTGGATGAGGAAGATCCAAGACCAAGACCCTCAATTGTTCTTGAAATCTATGAGGGAGCAGTCCAATCTAGGGTTTAAAGACCTCCAAACCCCTGTCTCTCTCTTCAATCAAATGACCTCTTTGCGTCCCCTGCCTTCCATTATTGATTTCACTCGCCTCTTTTCTTCCATTCTCAAGACCAATAGACCCCCGATGGAACTTGATGACAAATACCACCTTGTAATTTCTCTCTTCAAACAGCTTGGCTTGCCAGGTTATGGTGTCCGTCTTCGTCTTCGTCCTGATGTTTATTCCTTTAACATCCTCATCAATTGTTACTGCCGCTTGGGCCGTGTTGATTTGGGGTTTTCCCTTCTGGGTACTCTTATTAAGCTTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187199.p1 GENE.R_Transcript_187199~~R_Transcript_187199.p1 ORF type:3prime_partial len:166 (+),score=21.92,PPR_1|PF12854.3|1.5e+03,PPR_1|PF12854.3|7.9e-09,PPR|PF01535.16|1.1e+03,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|1.4e-05 R_Transcript_187199:193-687(+)
MARHRKASSCLFGNFLSPLLNSISHYPWFHFQFQFHSTTWMRKIQDQDPQLFLKSMREQSNLGFKDLQTPVSLFNQMTSLRPLPSIIDFTRLFSSILKTNRPPMELDDKYHLVISLFKQLGLPGYGVRLRLRPDVYSFNILINCYCRLGRVDLGFSLLGTLIKLG

Click here to download the sequence:
Link to NCBI Protein BLAST