Transcript Information: R_Transcript_187200.p2


Annotated TAIR IDAT1G62680.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23208247-23209893 | Reverse length=548
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0140533863733
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.3603258304025
Replicate 20.99381697071936
Replicate 31.0084228122437
Condition 3: 24 Hour
Replicate 11.020346987898
Replicate 20.73517529635258
Replicate 31.4591803124598


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187200.p2 GENE.R_Transcript_187200~~R_Transcript_187200.p2 ORF type:3prime_partial len:90 (+),score=12.90,PPR_1|PF12854.3|2.5e-09,PPR|PF01535.16|9.6e+02,PPR|PF01535.16|4.5e-06 R_Transcript_187200:329-595(+)
ATGGCCTCTTTGTGTCCCCTGCCTTCCATCATTTATTTCAATCACCCCTTTTCTTCCATTCTCAAGACCAAGACACTCCCTAACGAATTTGATGACAAATACCACCTTGTCATTTCTCTCTTCAAACAGCTTGGCTTGCCAGGTTATGGTGTCCGTCTTCGTCTTCGTCCTGATGTTTATTCCTTTAACATCCTCATCAATTGTTACTGCCGCTTGGGCCGTGTTGATTTGGGGTTTTCCCTTCTGGGTACTCTTATTAAGCTTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187200.p2 GENE.R_Transcript_187200~~R_Transcript_187200.p2 ORF type:3prime_partial len:90 (+),score=12.90,PPR_1|PF12854.3|2.5e-09,PPR|PF01535.16|9.6e+02,PPR|PF01535.16|4.5e-06 R_Transcript_187200:329-595(+)
MASLCPLPSIIYFNHPFSSILKTKTLPNEFDDKYHLVISLFKQLGLPGYGVRLRLRPDVYSFNILINCYCRLGRVDLGFSLLGTLIKLG

Click here to download the sequence:
Link to NCBI Protein BLAST