Transcript Information: R_Transcript_187201.p1


Annotated TAIR IDAT1G06580.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2014440-2015942 | Reverse length=500
E-Value9E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.17643949929662
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.19292274981264
Replicate 20.18533831000485
Replicate 30.5517908744596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187201.p1 GENE.R_Transcript_187201~~R_Transcript_187201.p1 ORF type:3prime_partial len:119 (-),score=16.71,PPR_1|PF12854.3|4.5e-09,PPR_1|PF12854.3|0.012,PPR_2|PF13041.2|4.5e-10,PPR|PF01535.16|7.3e+03,PPR|PF01535.16|7.3e-06,PPR|PF01535.16|31 R_Transcript_187201:1-354(-)
ATGACCTCTTTGCGTCCCCTGCCTTCCATTATTGATTTCAGTCGCCTCTTTTCTTCCATTCTCAAGACCGAGAGACCCCCGATGGAACTTGATGACAAATACCACCCTGTAATTTCTCTCTTCAAACAGCTTGGCTTGCCTGGTAATGGTAATGGTAATGGTGTCCGTCTTCGTCTTCGTCCTGATGTTTATTCCTTTAACATCCTGATCAATTGTTACTGCCGCTTGGGCCGTGTTGATTTGGGGTTTTCCCTTCTGGGTGCTCTTATTACGCTTGGGTTTCAACCAAATTGTGTCGTCTTTACAACTTTACTTGATGGCTTCATCCACCATGATCAAATCCCTAAGAGATCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187201.p1 GENE.R_Transcript_187201~~R_Transcript_187201.p1 ORF type:3prime_partial len:119 (-),score=16.71,PPR_1|PF12854.3|4.5e-09,PPR_1|PF12854.3|0.012,PPR_2|PF13041.2|4.5e-10,PPR|PF01535.16|7.3e+03,PPR|PF01535.16|7.3e-06,PPR|PF01535.16|31 R_Transcript_187201:1-354(-)
MTSLRPLPSIIDFSRLFSSILKTERPPMELDDKYHPVISLFKQLGLPGNGNGNGVRLRLRPDVYSFNILINCYCRLGRVDLGFSLLGALITLGFQPNCVVFTTLLDGFIHHDQIPKRS

Click here to download the sequence:
Link to NCBI Protein BLAST