Transcript Information: R_Transcript_187234.p2


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95067504972493
Replicate 20.21871146266977
Replicate 30.95444739983968
Condition 2: 8 Hour
Replicate 10.25506109320047
Replicate 20.9317034100494
Replicate 30.1890792772957
Condition 3: 24 Hour
Replicate 10.71743147586575
Replicate 20.22974228011018
Replicate 30.22799692382185


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187234.p2 GENE.R_Transcript_187234~~R_Transcript_187234.p2 ORF type:complete len:96 (+),score=13.24,RVT_2|PF07727.10|1.7e-10 R_Transcript_187234:359-646(+)
ATGCTTTTACAGTTTTTCTTTTCCATGTTTCAACCTAATGATTATGAAGAAGCTCTCACTGATTCTAATTGGATTGTTGCTATGCAGGATGAATTACATCAATTTGAAAGAAGCAAAGTATGGCATCTTGTGCCTAGACCCGACGACCATCCCATAATAGAACTCAAGTGGATTTTGCGAAACAAACTTGATGAATATGGGACAATCGTGAGGAATAAGGCAAGGCTGGTGGCAAAGGATACAATCAACAAGAAGGGATTGACTATAACGAAACCTTTGCACCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187234.p2 GENE.R_Transcript_187234~~R_Transcript_187234.p2 ORF type:complete len:96 (+),score=13.24,RVT_2|PF07727.10|1.7e-10 R_Transcript_187234:359-646(+)
MLLQFFFSMFQPNDYEEALTDSNWIVAMQDELHQFERSKVWHLVPRPDDHPIIELKWILRNKLDEYGTIVRNKARLVAKDTINKKGLTITKPLHQ*

Click here to download the sequence:
Link to NCBI Protein BLAST