Transcript Information: R_Transcript_187249.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.098134198681284
Replicate 20
Replicate 30.12315450320512
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.11767583164999


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187249.p1 GENE.R_Transcript_187249~~R_Transcript_187249.p1 ORF type:internal len:186 (-),score=17.88,rve|PF00665.22|1.3e-27,gag_pre-integrs|PF13976.2|1.6e-12,gag_pre-integrs|PF13976.2|5.8e+03,rve_3|PF13683.2|1.8e-05 R_Transcript_187249:1-555(-)
GGAAACGACTCTACTCTGTGGCACAAAAGACTAGGTCATGCTAGTCCAAACTTGATACACAAGCTATACTCACAAGACTTAGTAGAAGGATTGCCTCAAATTAAAGCTAATGAAATTAAGTTTTGTGATGCGTGTGTCAAAGGTAAACAAGTAAGATGTTCCTTTCATTCCAAGAATGTGGTAAGCACTAAGAAACCCTTTGAGTTACTTCACATAGACTTATGTGGACCCATGACTGTAAGAAGTCGTGGAGGTAAGCACTATGTACTTGTTGTTGTTGATGACTATACTAGATATACTTGGACTTTGTTTTTGTCAACCAAGGATAAAACATTTGATGAATTTGTTACCTTGGTTAGAAAAATGGAAAAGCAATCTGGTAATGTGTTGGTTAAAATTAGATCCGATCATGGAGGAGAATTTGAAAATAACACATTCCTTGATTATTGTAGGGAACACGGCGTGGACCACAACTTTTCAGCACCAAGGACTCCACAACAAAATGGTGTAGTGGAGAGAAAGAATAGAACACTTGAAGAGATGGCTAGAACGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187249.p1 GENE.R_Transcript_187249~~R_Transcript_187249.p1 ORF type:internal len:186 (-),score=17.88,rve|PF00665.22|1.3e-27,gag_pre-integrs|PF13976.2|1.6e-12,gag_pre-integrs|PF13976.2|5.8e+03,rve_3|PF13683.2|1.8e-05 R_Transcript_187249:1-555(-)
GNDSTLWHKRLGHASPNLIHKLYSQDLVEGLPQIKANEIKFCDACVKGKQVRCSFHSKNVVSTKKPFELLHIDLCGPMTVRSRGGKHYVLVVVDDYTRYTWTLFLSTKDKTFDEFVTLVRKMEKQSGNVLVKIRSDHGGEFENNTFLDYCREHGVDHNFSAPRTPQQNGVVERKNRTLEEMARTM

Click here to download the sequence:
Link to NCBI Protein BLAST