Transcript Information: R_Transcript_187401.p1


Annotated TAIR IDAT5G15800.2
Annotated Gene NameK-box region and MADS-box transcription factor family protein
Annotated Gene Symbol(s)SEP1, AGL2
Annotation TypeHomolog
Chromosome Positionchr5:5151594-5153767 | Reverse length=262
E-Value3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3621478882577
Replicate 21.6055994435993
Replicate 33.5033833970586
Condition 2: 8 Hour
Replicate 11.5843794965864
Replicate 21.7099497878554
Replicate 33.7370963041973
Condition 3: 24 Hour
Replicate 13.51119404659
Replicate 21.9460522550509
Replicate 33.9912873252577


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187401.p1 GENE.R_Transcript_187401~~R_Transcript_187401.p1 ORF type:complete len:170 (+),score=25.35,SRF-TF|PF00319.14|8.2e-27,K-box|PF01486.13|4.5e-07 R_Transcript_187401:149-658(+)
ATGGGAAGGAGAAAGATACAGATGAAGAGGATCGAAGATAAGAGCAGCCGTCAAGTCACTTTCTCGAAAAGAAGGTCTGGACTTATCAAGAAAGCTCGTGAACTCTCTGTGCTTTGCGATGTTGAGGTTGCTCTTATCGTCTTCTCTAGCCGTGGTCGCCTCTACGAATTCTGTAGCAGCTCTACTTCCAGTCTGTCTCAGGTTCTTAGGCGTTACCAAGCTAATACTGCACTGAGCGGACATGCATCAACTGGAACCAGTGAAGTAGAGAATCCTCCTCAATCCAGTTACTCAGACATCCAGACATGTACTGAACTAGTGAAAACAGTTAAAAGGTGTCTAGATGGCCAGGAGCAGGCTAACTTGTATGACTTTGTACAGTTAGAGAAACAACTTGATGCAGCTCTGTCACAAACTAGAACACGGAAGACAGAACTGATGCTACAGTCTACGATGTCTCTTCAGAAGCAGGTAAGTTGTTTCTCCCTCTTTAAATTGTCCACAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187401.p1 GENE.R_Transcript_187401~~R_Transcript_187401.p1 ORF type:complete len:170 (+),score=25.35,SRF-TF|PF00319.14|8.2e-27,K-box|PF01486.13|4.5e-07 R_Transcript_187401:149-658(+)
MGRRKIQMKRIEDKSSRQVTFSKRRSGLIKKARELSVLCDVEVALIVFSSRGRLYEFCSSSTSSLSQVLRRYQANTALSGHASTGTSEVENPPQSSYSDIQTCTELVKTVKRCLDGQEQANLYDFVQLEKQLDAALSQTRTRKTELMLQSTMSLQKQVSCFSLFKLSTR*

Click here to download the sequence:
Link to NCBI Protein BLAST