Transcript Information: R_Transcript_187569.p1


Annotated TAIR IDAT5G12440.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4035891-4038604 | Reverse length=650
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4633106156827
Replicate 22.97871389989
Replicate 34.9935102718256
Condition 2: 8 Hour
Replicate 14.9141182247066
Replicate 26.8862231275623
Replicate 39.8609095757812
Condition 3: 24 Hour
Replicate 18.4999493888039
Replicate 25.7999988777989
Replicate 38.7096402733328


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187569.p1 GENE.R_Transcript_187569~~R_Transcript_187569.p1 ORF type:internal len:289 (+),score=75.51,zf-CCCH|PF00642.20|6.1e-06 R_Transcript_187569:2-865(+)
GTTTCTAGGCCTAACCCACTTTCTCTTTCACTTCCTTCTCCAAGATTACCCACCAATGGGTTTAACCCATCGTCTCCTTCTTCACCCTCAGTTTGGTCTCCACATCACTCTTTAAGCCCTAATGCTAATGCAAGTCATTCTTTTACTAATGGGTCTTTCTCATCTCAGTCAGTTGGGTTTAGTGGGGTTAGCAGCAGCAGTAGGGAGAAATTTGTGGATGAGTACCATTTACAAGACCAAAATCTCACATTTCTGAATGACCCATTAGCAGCTGTGCCTTCTAAAAATGGGGACTTTTTTGAGCAAGGTGTGGATTTGAGTATGAGTCCTAGTTGTAGGAGTGATTCTATGCTGTACCCATTTTGTTTCGATAACTCAGATGGAGGTGGTGTCGAGGATAGAACTCATTTTCACAGAAGGAGTTCTTCATTCAATGATGTTTATTATGGGACTGCTGATTCAACTTCTGGGTGTGGTTTCAAGCCTTGTCTTTACTTTGCTAAGGGCTTCTGCAAGAATGGGAGTACTTGTAAGTTTGTTCATGGTGCTGGGTTTGGAGATTCTGGTGATAATTCTGGGCCCATTGTTGGTTCTCCTTGCCAATACGATGCTTTTGAGCAGTGCCAAGAAGAGATGCTAAGGGCAAAGTTAGTTCAGCAACAAAGATTGGCTGCTGCTCAGTTGATGGCTAGTGGGATGAATTTACCTTATAAGAAGTTTAATTTTCTTCAAAGCGAGGCTCAGAGATCTGCAGCTGCATCGTTGACGATGGGTGAGGAGTTTCACAAGTTGAACCGTGTGAGGATGTCGAGGAATGAGTTTTCTGGAATGGGTTTGAGAGGAGATTCAAATCCTGGTTCTAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187569.p1 GENE.R_Transcript_187569~~R_Transcript_187569.p1 ORF type:internal len:289 (+),score=75.51,zf-CCCH|PF00642.20|6.1e-06 R_Transcript_187569:2-865(+)
VSRPNPLSLSLPSPRLPTNGFNPSSPSSPSVWSPHHSLSPNANASHSFTNGSFSSQSVGFSGVSSSSREKFVDEYHLQDQNLTFLNDPLAAVPSKNGDFFEQGVDLSMSPSCRSDSMLYPFCFDNSDGGGVEDRTHFHRRSSSFNDVYYGTADSTSGCGFKPCLYFAKGFCKNGSTCKFVHGAGFGDSGDNSGPIVGSPCQYDAFEQCQEEMLRAKLVQQQRLAAAQLMASGMNLPYKKFNFLQSEAQRSAAASLTMGEEFHKLNRVRMSRNEFSGMGLRGDSNPGSR

Click here to download the sequence:
Link to NCBI Protein BLAST