Transcript Information: R_Transcript_187571.p1


Annotated TAIR IDAT5G12440.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4035891-4038604 | Reverse length=650
E-Value4E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61874443914301
Replicate 20.17793474929066
Replicate 30.29118734232397
Condition 2: 8 Hour
Replicate 10.2075073300614
Replicate 20.28424849798117
Replicate 30.69222243891306
Condition 3: 24 Hour
Replicate 10.38911537674075
Replicate 20.18690897364896
Replicate 30.92744511385158


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187571.p1 GENE.R_Transcript_187571~~R_Transcript_187571.p1 ORF type:internal len:236 (+),score=67.43,zf-CCCH|PF00642.20|4.6e-06 R_Transcript_187571:3-707(+)
GGGTCTTTCTCATCTCAATCATTTGGGTTTAGTGGGGTTAGTAACAGCAGTAGAGAGAATTTTGTTGATGAGTACCATTTGCAAGACCAAAATCTCTCCTTTCTGAATGACCCACTTGGTATACCTTCTAGAAATGGCGACTTTTTTGAGCAAGGTATGGACTTGAGTACGAGTCCTGGTTGTAGGAGTGATTCTATGCTAAACCCATATTGCTGGGATAACTCAGATGGTGGTGGTGTTGAGAGTCATTTTCACAGGAGGAGTTCTTCATTCAATGATGTTTATTATGGGACTGCTGATTCAACTTCTGGGTGTGGTTTCAAGCCTTGTCTTTACTTTGCTAAGGGCTTCTGCAAGAATGGGAGTACTTGTAAGTTTGTTCATGGTGCTGGGTTTGGAGATTCTGGTGATAATTCTGGGCCCATTGTTGGTTCTCCTTGCCAATACGATGCTTTTGAGCAGTGCCAAGAAGAGATGCTAAGGGCAAAGTTAGTTCAGCAACAAAGATTGGCTGCTGCTCAGTTGATGGCTAGTGGGATGAATTTACCTTATAAGAAGTTTAATTTTCTTCAAAGCGAGGCTCAGAGATCTGCAGCTGCATCGTTGACGATGGGTGAGGAGTTTCACAAGTTGAACCGTGTGAGGATGTCGAGGAATGAGTTTTCTGGAATGGGTTTGAGAGGAGATTCAAATCCTGGTTCTAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187571.p1 GENE.R_Transcript_187571~~R_Transcript_187571.p1 ORF type:internal len:236 (+),score=67.43,zf-CCCH|PF00642.20|4.6e-06 R_Transcript_187571:3-707(+)
GSFSSQSFGFSGVSNSSRENFVDEYHLQDQNLSFLNDPLGIPSRNGDFFEQGMDLSTSPGCRSDSMLNPYCWDNSDGGGVESHFHRRSSSFNDVYYGTADSTSGCGFKPCLYFAKGFCKNGSTCKFVHGAGFGDSGDNSGPIVGSPCQYDAFEQCQEEMLRAKLVQQQRLAAAQLMASGMNLPYKKFNFLQSEAQRSAAASLTMGEEFHKLNRVRMSRNEFSGMGLRGDSNPGSR

Click here to download the sequence:
Link to NCBI Protein BLAST