Transcript Information: R_Transcript_187572.p1


Annotated TAIR IDAT1G51520.2
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19106789-19109093 | Forward length=513
E-Value2.1E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.123479226568
Replicate 24.1379570163507
Replicate 38.1093195139664
Condition 2: 8 Hour
Replicate 19.5619983553111
Replicate 210.935613747149
Replicate 314.839272915937
Condition 3: 24 Hour
Replicate 116.003434965297
Replicate 29.5787438247398
Replicate 313.739727029731


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187572.p1 GENE.R_Transcript_187572~~R_Transcript_187572.p1 ORF type:internal len:274 (-),score=79.70,RRM_1|PF00076.18|9.3e+03,RRM_1|PF00076.18|5.7e-08,zf-CCCH|PF00642.20|6.8e-06,RRM_5|PF13893.2|1.3e-05 R_Transcript_187572:3-821(-)
GGGGACTATTTTGAGCAAGGTGTGGATTTGAGTATGAGTCCTAGTTGTAGGAGTGATTCTATGCTGTACCCATTTTGTTTCGATAACTCAGATGGAGGTAGTGTGGAGGGTAAGACTCATTTTCACAGGAGTTCTTCATTCAATGATGTTTATTATGGGACTGATGATTCAGCTTCTGGGTTTGGTTTCAAGCCTTGTCTTTACTATGCTAAGGGCTTCTGCAAGAATGGGAGTACTTGTAAGTTTGTTCATGGTGCTGGGTTTGGAGATTCTGGTGATAATTCTGTTCCCAAGTTTGATCCTTTTGAGCAGTGCCAAGAAGAAATGCTAAGGTCAAAGTTTGCTCAGCAACAAAGATTGGCTGGTCAATTGATGGCTAGTGGGGTCAATTTACCTTATAACAAGTCAAAGTTTCTCAGAACTGAGGCTCAAAGATCTGCAGCTGCAGCATTGATGATGGGTGAGGAGTTTCACAAGCTGAACCGAGTGAGGATGTCAAGGAATGAATTTTCTGGAATGAGTTTGAGAGGAGATTCAAATCCTGGTTCTAGACAAATTTATTTGACTTTCCCAGCTGATAGCACCTTCAAAGAAGAGGATGTTTCTCAGTATTTTAGCAACTTTGGACCAGTTCAAGATGTGAGGATTCCATATCAACAGAAGAGAATGTTTGGTTTTGTGACCTTTGTGTATCCTGAGACTGTCAATATGATTTTGGCCAAAGGAAACCCCCACTTTGTTTGTGATTCTCGTGTCCTTGTCAAGCCTTATAAGGAGAAAGGAAAAATTCCTTACAAGAAGCAACAACAGCAGCAGCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187572.p1 GENE.R_Transcript_187572~~R_Transcript_187572.p1 ORF type:internal len:274 (-),score=79.70,RRM_1|PF00076.18|9.3e+03,RRM_1|PF00076.18|5.7e-08,zf-CCCH|PF00642.20|6.8e-06,RRM_5|PF13893.2|1.3e-05 R_Transcript_187572:3-821(-)
GDYFEQGVDLSMSPSCRSDSMLYPFCFDNSDGGSVEGKTHFHRSSSFNDVYYGTDDSASGFGFKPCLYYAKGFCKNGSTCKFVHGAGFGDSGDNSVPKFDPFEQCQEEMLRSKFAQQQRLAGQLMASGVNLPYNKSKFLRTEAQRSAAAALMMGEEFHKLNRVRMSRNEFSGMSLRGDSNPGSRQIYLTFPADSTFKEEDVSQYFSNFGPVQDVRIPYQQKRMFGFVTFVYPETVNMILAKGNPHFVCDSRVLVKPYKEKGKIPYKKQQQQQQ

Click here to download the sequence:
Link to NCBI Protein BLAST