Transcript Information: R_Transcript_187687.p1


Annotated TAIR IDAT1G63080.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23388884-23390728 | Reverse length=614
E-Value5E-86
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14563532676637
Replicate 20.22336489804572
Replicate 30
Condition 2: 8 Hour
Replicate 10.32560990621337
Replicate 20.47576344342948
Replicate 30.28965336096362
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187687.p1 GENE.R_Transcript_187687~~R_Transcript_187687.p1 ORF type:5prime_partial len:376 (+),score=63.15,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|5.3e-17,PPR_2|PF13041.2|0.00061,PPR_2|PF13041.2|2.2e-14,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|1.3e-17,PPR_2|PF13041.2|3.2e-19,PPR_2|PF13041.2|3e-16,PPR_2|PF13041.2|7.1e-14,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|2.3e-11,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.2e-11,PPR_1|PF12854.3|5e-08,PPR_1|PF12854.3|5.4e-12,PPR_1|PF12854.3|2.1e-12,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|1.6e-08,PPR|PF01535.16|0.0028,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|0.0035,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|7.3e-09,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.0011,PPR|PF01535.16|3e-05,PPR_3|PF13812.2|0.068,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|6.9e-05,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.51,MRP-S27|PF10037.5|0.0084,MRP-S27|PF10037.5|1.9,MRP-S27|PF10037.5|0.66,MRP-S27|PF10037.5|0.56,RPM2|PF08579.7|3.5e+02,RPM2|PF08579.7|0.041,RPM2|PF08579.7|1.8e+02 R_Transcript_187687:3-1130(+)
GACATTGTTATCTATGGCACTATGATCAAAGGCCTTTGTAGAATTGGCGACAATGCTGGTGCTCTCCGCTTGCTCGGGAACATGGACCGTTCTGCCCTTTGTAAGCCCGACCTTGTCATTTACAGCACTATTATTGACAGTCTTTGTAAAGACAGGCTGTTGAATAAGGCTTTGAAACTCTTCTCTGAGATGAAGGGCAAGGGCATTTCACCTGATGTCTACACTTACACCTCTTTGGCTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTATTGGCTGACATGTTGGAAAGTAGCATTTCAACAGGTGTTCAGACCTTCAACATGCTTGTGGACATGTGCTGCAAAGATGGCAGGGTCGAGGAAGCAGAATCCATAGTCGAATTCATGATTCAGAGAGGTGAGGCTCCAAACATCATTACCTACAATTCTCTCTTGGATGGATACTGTTTACGAGGCCAAATGGACGAGGCATCCAAGTTACTTGATTTCATGATCAAACGTGGTTTCAATTCTGATGTTGTGACCTTTTCCACTTTGATAAACGGATTTATCAAGGCTAAAAACATTGACAAAGGTTTCAAAGTTTTTCAGGAAATGTCTTGTCATGGGATTGTACCTAATGTTGCTACCTACACCACTCTTATTGATGGCTTGTGTAAAGCTAGAAAGCTGCAAGCTGCCGGTCAGATGTTTAACGAAATGCAGGTCAATGGAGTTACTCCTGATGTGGTGACTTACGCATCTTTGCTTGATGGCCTCTGCCAGAACGCACAGCTTGATGAGGCAATGAACGTCTTGAGGGAGATGAATTCCAAGGGAGTGCGCCCTAATCTCATCATCTACAATATCTTAATCGACAGTCTTTGTGAATCCAGTTTCCTCAAAGACGCATTGAATGTCTTCTACAGTCTTCCATCAAAGGGTTTGCACCCAGATCATCGTACATACAATATAATGATCAAAGGATTCTGCAAGAAAGGGCTACCTGATGAGGAAATGAGCTTTCAAAGGAGATGGAGAACAATGGGTGCTTACCAGATGATTGCACCTACAACACAATTATTCGAGGATGCCTTTCTGCTAATGATATCAGGTAGGCCTTGGAGCTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187687.p1 GENE.R_Transcript_187687~~R_Transcript_187687.p1 ORF type:5prime_partial len:376 (+),score=63.15,PPR_2|PF13041.2|3e-10,PPR_2|PF13041.2|5.3e-17,PPR_2|PF13041.2|0.00061,PPR_2|PF13041.2|2.2e-14,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|1.3e-17,PPR_2|PF13041.2|3.2e-19,PPR_2|PF13041.2|3e-16,PPR_2|PF13041.2|7.1e-14,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|2.3e-11,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.2e-11,PPR_1|PF12854.3|5e-08,PPR_1|PF12854.3|5.4e-12,PPR_1|PF12854.3|2.1e-12,PPR_1|PF12854.3|1.6e-07,PPR_1|PF12854.3|1.6e-08,PPR|PF01535.16|0.0028,PPR|PF01535.16|3.1e-08,PPR|PF01535.16|0.0035,PPR|PF01535.16|2.3e-06,PPR|PF01535.16|7.3e-09,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|1.8e-06,PPR|PF01535.16|0.0011,PPR|PF01535.16|3e-05,PPR_3|PF13812.2|0.068,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|6.9e-05,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|0.00027,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|3,PPR_3|PF13812.2|0.51,MRP-S27|PF10037.5|0.0084,MRP-S27|PF10037.5|1.9,MRP-S27|PF10037.5|0.66,MRP-S27|PF10037.5|0.56,RPM2|PF08579.7|3.5e+02,RPM2|PF08579.7|0.041,RPM2|PF08579.7|1.8e+02 R_Transcript_187687:3-1130(+)
DIVIYGTMIKGLCRIGDNAGALRLLGNMDRSALCKPDLVIYSTIIDSLCKDRLLNKALKLFSEMKGKGISPDVYTYTSLARGFFNLGLREEAMALLADMLESSISTGVQTFNMLVDMCCKDGRVEEAESIVEFMIQRGEAPNIITYNSLLDGYCLRGQMDEASKLLDFMIKRGFNSDVVTFSTLINGFIKAKNIDKGFKVFQEMSCHGIVPNVATYTTLIDGLCKARKLQAAGQMFNEMQVNGVTPDVVTYASLLDGLCQNAQLDEAMNVLREMNSKGVRPNLIIYNILIDSLCESSFLKDALNVFYSLPSKGLHPDHRTYNIMIKGFCKKGLPDEEMSFQRRWRTMGAYQMIAPTTQLFEDAFLLMISGRPWSL*

Click here to download the sequence:
Link to NCBI Protein BLAST