Transcript Information: R_Transcript_187690.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value2E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56767581916589
Replicate 20.15069115131314
Replicate 30.82201211469447
Condition 2: 8 Hour
Replicate 10.58578624275706
Replicate 20.42795946107532
Replicate 30
Condition 3: 24 Hour
Replicate 10.10984596759667
Replicate 20.36934644075129
Replicate 30.73308101822144


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187690.p1 GENE.R_Transcript_187690~~R_Transcript_187690.p1 ORF type:5prime_partial len:418 (+),score=77.98,PPR_2|PF13041.2|3.5e-10,PPR_2|PF13041.2|6.1e-17,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|7.5e-13,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|1.7e-17,PPR_2|PF13041.2|1.4e-19,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|1.1e-14,PPR_2|PF13041.2|1.9e-16,PPR_2|PF13041.2|1.6e-05,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|2.6e-11,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|6.7e-08,PPR_1|PF12854.3|8.2e-14,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|2.6e-09,PPR_1|PF12854.3|1.9e-12,PPR_1|PF12854.3|3.8e-06,PPR|PF01535.16|0.0032,PPR|PF01535.16|3.5e-08,PPR|PF01535.16|0.004,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|7.5e-05,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|1.4e-09,PPR|PF01535.16|6.5e-05,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|7.7e-06,PPR_3|PF13812.2|0.0006,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|0.0063,MRP-S27|PF10037.5|0.0095,MRP-S27|PF10037.5|24,MRP-S27|PF10037.5|13,MRP-S27|PF10037.5|2.1,MRP-S27|PF10037.5|2.7e+02,MRP-S27|PF10037.5|4.5e+02 R_Transcript_187690:3-1256(+)
GACATTGTTATCTATGGCACTATGATCAAAGGCCTTTGTAGAATTGGCGACAATGCTGGTGCTCTCCGCTTGCTCGGGAACATGGACCGTTCTGCCCTTTGTAAGCCCGACCTTGTCATTTACAGCACTATTATTGACAGTCTTTGTAAAGACAGGCTGTTGAATAAGGCTTTGAAACTCTTCTCTGAGATGAAGGGCAAGGGCATTTCACCTGATGTCTACACTTACACCTCTTTGGCTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTATTGGCTGACATGTTGGAAAGTAGCATTTCAACAGGTGTTCAGACCTTCAACATGCTTGTGGACATGTGCTGCAAAGATGGCAGGGTCGAGGAAGCAGAATCCATAGTCGAATTCATGATTCAGAGAGGTGAGGCTCCAAACATCATTACGTACAGTGCTCACTTGGATGGATATTGTTTACGTGGCCAAATGGACGAGGCATCCAAGTTACTTGATTTCATGCTCAAGCGTGGTTTCCATCCTCATGTTGTGACCTTTAACACCTTGATCAATGGGTATGTCAAGGCTAAAATATTCGGCAAAGCCATCAAAATTTTCCAGCAAATGCCTTGTCATGGGATTGTACCTAATGTTGCTACCTACACCACTCTTATAGATGGATTGTGTAAAGCTAGAAAGCTGCAAGCTGCCCGTCAGATGTTTGACGAAATGCAGGTCAATGGAGTTGCTCCTGATGTAGTGACTTACGCATCATTGCTTGATGGCCTATGCAAAAACGCACAGTTTGATGAGGCAATGGAATTCTTGAGGGAGATGAATGGCAAGGGAGTGCACCCTAATCTCACCATCTACAATATATTAATTGATGGTCTTTGTGAGGCTGGGTTTCTTAAAGATGCATCAAATGTCTTCTCCAGTCTCCTGTCTAAGGGTTTGCGGCTAGATAATCAGACGTACAACATAATGATCAAAGGATTTTGTAAGAAAGGACTACTAAACGAGGCAAATGAGCTGTTCAAGAAGATGGAAGACAATGAATGTCCACCAGATGATTGCACCTACAACACAATCATTCGTGGTCACCTTTCTGCCAATAATATTAGGAAGGCCTTGGAGCTTGTGACCAGTATGAGGAGTAAAGGATATGCGGCAGAGAATCACATAATCACCTTATTTGCTAATTTACTCTCTGCTAATAAGATTAGTGATGTTGACAGGGAATTGCTGCAAACATTTTTCGCAACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187690.p1 GENE.R_Transcript_187690~~R_Transcript_187690.p1 ORF type:5prime_partial len:418 (+),score=77.98,PPR_2|PF13041.2|3.5e-10,PPR_2|PF13041.2|6.1e-17,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|7.5e-13,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|1.7e-17,PPR_2|PF13041.2|1.4e-19,PPR_2|PF13041.2|2.6e-16,PPR_2|PF13041.2|1.1e-14,PPR_2|PF13041.2|1.9e-16,PPR_2|PF13041.2|1.6e-05,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|2.6e-11,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|1.8e-07,PPR_1|PF12854.3|6.7e-08,PPR_1|PF12854.3|8.2e-14,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|2.6e-09,PPR_1|PF12854.3|1.9e-12,PPR_1|PF12854.3|3.8e-06,PPR|PF01535.16|0.0032,PPR|PF01535.16|3.5e-08,PPR|PF01535.16|0.004,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|7.5e-05,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|8.6e-07,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|1.4e-09,PPR|PF01535.16|6.5e-05,PPR_3|PF13812.2|0.079,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|0.045,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|7.7e-06,PPR_3|PF13812.2|0.0006,PPR_3|PF13812.2|0.32,PPR_3|PF13812.2|0.0014,PPR_3|PF13812.2|0.0063,MRP-S27|PF10037.5|0.0095,MRP-S27|PF10037.5|24,MRP-S27|PF10037.5|13,MRP-S27|PF10037.5|2.1,MRP-S27|PF10037.5|2.7e+02,MRP-S27|PF10037.5|4.5e+02 R_Transcript_187690:3-1256(+)
DIVIYGTMIKGLCRIGDNAGALRLLGNMDRSALCKPDLVIYSTIIDSLCKDRLLNKALKLFSEMKGKGISPDVYTYTSLARGFFNLGLREEAMALLADMLESSISTGVQTFNMLVDMCCKDGRVEEAESIVEFMIQRGEAPNIITYSAHLDGYCLRGQMDEASKLLDFMLKRGFHPHVVTFNTLINGYVKAKIFGKAIKIFQQMPCHGIVPNVATYTTLIDGLCKARKLQAARQMFDEMQVNGVAPDVVTYASLLDGLCKNAQFDEAMEFLREMNGKGVHPNLTIYNILIDGLCEAGFLKDASNVFSSLLSKGLRLDNQTYNIMIKGFCKKGLLNEANELFKKMEDNECPPDDCTYNTIIRGHLSANNIRKALELVTSMRSKGYAAENHIITLFANLLSANKISDVDRELLQTFFAT*

Click here to download the sequence:
Link to NCBI Protein BLAST