Transcript Information: R_Transcript_187691.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value2E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.50762853398676
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.31797516935878
Replicate 20.18328469992169
Replicate 30.060630760905533


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187691.p1 GENE.R_Transcript_187691~~R_Transcript_187691.p1 ORF type:internal len:361 (+),score=61.66,PPR_2|PF13041.2|2.8e-10,PPR_2|PF13041.2|4.9e-17,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|1.9e-14,PPR_2|PF13041.2|1e-16,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|3e-19,PPR_2|PF13041.2|2.9e-16,PPR_2|PF13041.2|6.6e-14,PPR_2|PF13041.2|5.3e-15,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|2.2e-11,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.1e-11,PPR_1|PF12854.3|4.7e-08,PPR_1|PF12854.3|5.1e-12,PPR_1|PF12854.3|1.9e-12,PPR_1|PF12854.3|1.5e-07,PPR_1|PF12854.3|3.6e-15,PPR_1|PF12854.3|0.13,PPR|PF01535.16|0.0026,PPR|PF01535.16|2.9e-08,PPR|PF01535.16|0.0033,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|6.9e-09,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1e-07,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0011,PPR|PF01535.16|5.1e-11,PPR|PF01535.16|4e+03,PPR_3|PF13812.2|0.065,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|6.5e-05,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|0.00025,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|1.7e-05,MRP-S27|PF10037.5|0.0071,MRP-S27|PF10037.5|2.4,MRP-S27|PF10037.5|0.68,MRP-S27|PF10037.5|0.55,MRP-S27|PF10037.5|3.2e+02,RPM2|PF08579.7|3.3e+02,RPM2|PF08579.7|0.036,RPM2|PF08579.7|1.6e+02 R_Transcript_187691:3-1082(+)
GACATTGTTATCTATGGCACTATGATCAAAGGCCTTTGTAGAATTGGCGACAATGCTGGTGCTCTCCGCTTGCTCGGGAACATGGACCGTTCTGCCCTTTGTAAGCCCGACCTTGTCATTTACAGCACTATTATTGACAGTCTTTGTAAAGACAGGCTGTTGAATAAGGCTTTGAAACTCTTCTCTGAGATGAAGGGCAAGGGCATTTCACCTGATGTCTACACTTACACCTCTTTGGCTCGAGGATTCTTTAATTTGGGCCTCAGAGAAGAAGCTATGGCCTTATTGGCTGACATGTTGGAAAGTAGCATTTCAACAGGTGTTCAGACCTTCAACATGCTTGTGGACATGTGCTGCAAAGATGGCAGGGTCGAGGAAGCAGAATCCATAGTCGAATTCATGATTCAGAGAGGTGAGGCTCCAAACATCATTACCTACAATTCTCTCTTGGATGGATACTGTTTACGAGGCCAAATGGACGAGGCATCCAAGTTACTTGATTTCATGATCAAACGTGGTTTCAATTCTGATGTTGTGACCTTTTCCACTTTGATAAACGGATTTATCAAGGCTAAAAACATTGACAAAGGTTTCAAAGTTTTTCAGGAAATGTCTTGTCATGGGATTGTACCTAATGTTGCTACCTACACCACTCTTATTGATGGCTTGTGTAAAGCTAGAAAGCTGCAAGCTGCCGGTCAGATGTTTAACGAAATGCAGGTCAATGGAGTTACTCCTGATGTGGTGACTTACGCATCTTTGCTTGATGGCCTCTGCCAGAACGCACAGCTTGATGAGGCAATGAACGTCTTGAGGGAGATGAATTCCAAGGGAGTGCGCCCTAATCTCATCATCTACAATATCTTAATCGACAGTCTTTGTGAATCCAGTTTCCTCAAAGACGCATTGAATGTCTTCTACAGTCTTCCATCAAAGGGTTTGCACCCAGATCATCGTACATACAATATAATGATCAAAGGATTCTGCAAGAAAGGGCTACTAGATGAGGCAAATGAGCTTTTAAAGGAGATGGAGAATAATGGATGCTCACTAGATGATTGCACCTACAACACAATTATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187691.p1 GENE.R_Transcript_187691~~R_Transcript_187691.p1 ORF type:internal len:361 (+),score=61.66,PPR_2|PF13041.2|2.8e-10,PPR_2|PF13041.2|4.9e-17,PPR_2|PF13041.2|0.00012,PPR_2|PF13041.2|1.9e-14,PPR_2|PF13041.2|1e-16,PPR_2|PF13041.2|1.2e-17,PPR_2|PF13041.2|3e-19,PPR_2|PF13041.2|2.9e-16,PPR_2|PF13041.2|6.6e-14,PPR_2|PF13041.2|5.3e-15,PPR_1|PF12854.3|1.9e-05,PPR_1|PF12854.3|2.2e-11,PPR_1|PF12854.3|1.1e-05,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|2.1e-11,PPR_1|PF12854.3|4.7e-08,PPR_1|PF12854.3|5.1e-12,PPR_1|PF12854.3|1.9e-12,PPR_1|PF12854.3|1.5e-07,PPR_1|PF12854.3|3.6e-15,PPR_1|PF12854.3|0.13,PPR|PF01535.16|0.0026,PPR|PF01535.16|2.9e-08,PPR|PF01535.16|0.0033,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|6.9e-09,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|1e-07,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0011,PPR|PF01535.16|5.1e-11,PPR|PF01535.16|4e+03,PPR_3|PF13812.2|0.065,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|0.00013,PPR_3|PF13812.2|6.5e-05,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|0.00025,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|1.7e-05,MRP-S27|PF10037.5|0.0071,MRP-S27|PF10037.5|2.4,MRP-S27|PF10037.5|0.68,MRP-S27|PF10037.5|0.55,MRP-S27|PF10037.5|3.2e+02,RPM2|PF08579.7|3.3e+02,RPM2|PF08579.7|0.036,RPM2|PF08579.7|1.6e+02 R_Transcript_187691:3-1082(+)
DIVIYGTMIKGLCRIGDNAGALRLLGNMDRSALCKPDLVIYSTIIDSLCKDRLLNKALKLFSEMKGKGISPDVYTYTSLARGFFNLGLREEAMALLADMLESSISTGVQTFNMLVDMCCKDGRVEEAESIVEFMIQRGEAPNIITYNSLLDGYCLRGQMDEASKLLDFMIKRGFNSDVVTFSTLINGFIKAKNIDKGFKVFQEMSCHGIVPNVATYTTLIDGLCKARKLQAAGQMFNEMQVNGVTPDVVTYASLLDGLCQNAQLDEAMNVLREMNSKGVRPNLIIYNILIDSLCESSFLKDALNVFYSLPSKGLHPDHRTYNIMIKGFCKKGLLDEANELLKEMENNGCSLDDCTYNTII

Click here to download the sequence:
Link to NCBI Protein BLAST