Transcript Information: R_Transcript_187763.p1


Annotated TAIR IDATCG00740.1
Annotated Gene NameRNA polymerase subunit alpha
Annotated Gene Symbol(s)RPOA
Annotation TypeOrtholog
Chromosome PositionchrC:77901-78890 | Reverse length=329
E-Value5.7E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1137.16097827245
Replicate 2169.12337936481
Replicate 3139.62517222626
Condition 2: 8 Hour
Replicate 1123.84469265225
Replicate 2132.54962039385
Replicate 398.41740324811
Condition 3: 24 Hour
Replicate 1103.04472434863
Replicate 2117.09685139304
Replicate 3119.24370906012


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187763.p1 GENE.R_Transcript_187763~~R_Transcript_187763.p1 ORF type:complete len:346 (+),score=3.64,RNA_pol_A_bac|PF01000.22|3.9e-13,RNA_pol_L|PF01193.20|5.3e-13,RNA_pol_A_CTD|PF03118.11|6.3e+03,RNA_pol_A_CTD|PF03118.11|2.4e-11 R_Transcript_187763:947-1984(+)
ATGATCAATTTTTATAATATTACTATGGTTCGAGAGAAAATCAGAGTATCTACTCGGACACTGCAGTGGAAGTGTGTTGAATCAAGAACGGATAGTAAATGTCTTTATTATGGGCGCTTTATTCTCTCTCCACTTATGAAAGGTCAAGCTGACACAATAGGAATTGCGATGCGAAGAGCTTTGCTTGGAGAAATAGAAGGAACATGCATCACACGTGCAAAATTTGAGAAAATACCACATGAATACTCGACCATAGTAGGTATTCAAGAATCGGTACACGAAATTTTAATGAATTTGAAAGAAATTGTATTGCGAAGTAATCTATATGGAACTTGTGAGGCGTCTATTTGTGTTAGGGGCCCTAAATGTGTAACTGCTCGAGATATAATCTTGCCACCTTATGTCGAAATAGTTGACAATACACAGCATATAGCTAGCTTAATGGAACCAATTGATTTGTGTATTGGATTACAACTCGAAAGAAATCGCGGATATCGTAAAAAAGCGCCAAATAACTTTCAAGATGGAAGTTATCCTATAGATGCTCTATTCATGCCTGTTCGAAACGTGAATCATAGTATTCATTCTTATGGGAATGGGAATGAAAAAGAAGAAATACTTTTTCTCGAAATATGGACAAATGGAAGTTTAACTCCGAAAGAAGCACTTTATGAAGCTTCCCGGAATTTAATTGATTTATTTATTCCTTTTATACATGCAGAAGAAGAAAACTTACATTTAGAGGACAATCAACACAAAGTTTCTTTACCCCTTTTTACCTTTCACAATAGATTGACTGAACTAAAGAAAAACAAAAAAAAAATAGCATTGAAATATATATTTATTGACCAATTAGAACTTCCACCTAGGATCTACAATTACCTAAAAAAGTCCAATATACATACAGTATTGGACCTTTTGAATAACAGTCAAGAAGATCTTAAAAAAATTGAATATTTTCGCATAGAAGACGTAAAACTAATATTAGACAGTCTAGAAAAACATTTCGCAATTGATTTACAAAAAAAGAAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187763.p1 GENE.R_Transcript_187763~~R_Transcript_187763.p1 ORF type:complete len:346 (+),score=3.64,RNA_pol_A_bac|PF01000.22|3.9e-13,RNA_pol_L|PF01193.20|5.3e-13,RNA_pol_A_CTD|PF03118.11|6.3e+03,RNA_pol_A_CTD|PF03118.11|2.4e-11 R_Transcript_187763:947-1984(+)
MINFYNITMVREKIRVSTRTLQWKCVESRTDSKCLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTCITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCEASICVRGPKCVTARDIILPPYVEIVDNTQHIASLMEPIDLCIGLQLERNRGYRKKAPNNFQDGSYPIDALFMPVRNVNHSIHSYGNGNEKEEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFIHAEEENLHLEDNQHKVSLPLFTFHNRLTELKKNKKKIALKYIFIDQLELPPRIYNYLKKSNIHTVLDLLNNSQEDLKKIEYFRIEDVKLILDSLEKHFAIDLQKKKR*

Click here to download the sequence:
Link to NCBI Protein BLAST