Transcript Information: R_Transcript_187767.p1


Annotated TAIR IDATCG00680.1
Annotated Gene Namephotosystem II reaction center protein B
Annotated Gene Symbol(s)PSBB
Annotation TypeOrtholog
Chromosome PositionchrC:72371-73897 | Forward length=508
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5860434095715
Replicate 23.2175077258767
Replicate 32.4301843422244
Condition 2: 8 Hour
Replicate 19.3806358835222
Replicate 22.3283432958405
Replicate 32.1396790515191
Condition 3: 24 Hour
Replicate 12.2551873504621
Replicate 21.9932061079893
Replicate 32.5370816827641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_187767.p1 GENE.R_Transcript_187767~~R_Transcript_187767.p1 ORF type:complete len:509 (+),score=45.22,PSII|PF00421.15|1.2e-262 R_Transcript_187767:1042-2568(+)
ATGGGTTTGCCTTGGTATCGTGTTCATACTGTTGTATTGAATGATCCCGGCCGGTTAATTTCTGTACATATAATGCATACAGCTCTGGTTGCTGGTTGGGCCGGTTCGATGGCTCTATATGAATTAGCAGTTTTTGATCCCTCTGACCCCGTTCTTGATCCAATGTGGAGACAGGGTATGTTTGTTATACCTTTCATGACTCGTTTAGGAATAACTAATTCATGGGGCGGTTGGAGTATTACAGGAGGGACTATAACGGATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCGCATATTGTGTTTTCTGGCTTGTGCTTTTTGGCAGCTATTTGGCATTGGGTGTATTGGGATCTCGAAATTTTTTCTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCTAAGATTTTTGGAATTCATTTATTTCTTTCCGGGGTGGCTTGTTTTGGTTTTGGTGCATTTCATGTAACAGGATTGTATGGTCCTGGAATATGGGTGTCCGATCCTTATGGGCTAACTGGAAAAGTACAACCTGTAAGTCCAGCATGGGGCGTGGAAGGTTTTGATCCTTTTATTCCAGGAGGAATAGCCTCTCACCATATTGCAGCAGGGACATTGGGCATATTAGCAGGTCTATTCCATCTTAGTGTCCGCCCCCCTCAGCGTCTATACAAGGGATTACGTATGGGAAATATTGAAACCGTTCTTTCGAGTAGTATCGCTGCTGTGTTTTTTGCAGCTTTTGTTGTTGCCGGAACTATGTGGTATGGTTCAGCAACTACCCCAATTGAATTATTTGGTCCCACTCGTTATCAATGGGATCAGGGATACTTTCAGCAAGAAATATATCGAAGAGTAAGTGCTGGGCTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCCGAAAAATTAGCTTTTTATGATTACATTGGGAATAATCCGGCAAAAGGAGGATTATTTAGAGCGGGCTCAATGGACAATGGCGATGGAATAGCTGTTGGATGGTTAGGACACCCAATTTTTAGAGATAAAGAAGGACGCGAACTCTTTGTCCGACGTATGCCGACTTTTTTTGAAACATTTCCAGTCGTTTTGATAGATGGAGACGGAATTGTTAGAGCTGACGTTCCTTTTAGAAGAGCGGAATCTAAGTATAGTGTTGAACAAGTAGGTGTAACTGTTGAGTTTTATGGTGGCGAACTCAACGGAGTCAGTTATAGTGATCCTGCTACTGTGAAAAAATATGCTAGACGTGCTCAATTGGGTGAAATTTTCGAATTAGATCGTGCTACTTTGAAATCTGATGGTGTTTTTCGTAGTAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCCTTTGCCCTACTCTTCTTCTTCGGACACATTTGGCATGGGGCTAGAACCTTGTTCAGAGATGTTTTTGCTGGTATTGACCCAGATTTGGATGTTCAAGTAGAATTTGGAGCATTCCAAAAACTTGGAGATCCAACTACAAGAAGACAAGGAGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_187767.p1 GENE.R_Transcript_187767~~R_Transcript_187767.p1 ORF type:complete len:509 (+),score=45.22,PSII|PF00421.15|1.2e-262 R_Transcript_187767:1042-2568(+)
MGLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITDPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFSDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVSPAWGVEGFDPFIPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLIDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDVQVEFGAFQKLGDPTTRRQGV*

Click here to download the sequence:
Link to NCBI Protein BLAST