Transcript Information: R_Transcript_188008.p2


Annotated TAIR IDAT4G08330.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast hits to 98 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:5255384-5256525 | Reverse length=164
E-Value2E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3275587794608
Replicate 22.3955510542085
Replicate 32.9209933847443
Condition 2: 8 Hour
Replicate 12.6293546252075
Replicate 23.1515336823148
Replicate 33.8983324822308
Condition 3: 24 Hour
Replicate 12.9275056196401
Replicate 23.2564811784745
Replicate 32.3503575502709


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188008.p2 GENE.R_Transcript_188008~~R_Transcript_188008.p2 ORF type:5prime_partial len:149 (-),score=14.91 R_Transcript_188008:2478-2924(-)
TGTGGATATCAGCTGAATCTGAACTCATGCAATAGAAACGTACCTGTAATTGGGTCCAAACACTATGGGAAATCCATGAAGAGGGGTATCATCTCCTTCTATTCCATTGATGAGACAAGGTTCACTCGAATCGAGCAACTCAAATGCAAGCCTTATTTCGTCTCACCTCGGTCCTGGGGATTATTCCAACGACGAACAAAGCTTCTGTGTCGAAAATGTGGTAATCATGTTGGCAACGCTTATCAGCCTGGCGTCCAGATTTCGGGTTCCAGATCTCTCAAGAGGAAAGATTACTCTGTTTCGGAATCAACTTCATCTGCACCAACATTTTCCTCATCATGGGGTTGGGATGGGATTTCTGGTGCAGGATCATTTGACATTAGAATTCGAGCTCTCCAGCCTTCTTCTTATGATGGATCAAATATCTTCGAAATGATACGATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188008.p2 GENE.R_Transcript_188008~~R_Transcript_188008.p2 ORF type:5prime_partial len:149 (-),score=14.91 R_Transcript_188008:2478-2924(-)
CGYQLNLNSCNRNVPVIGSKHYGKSMKRGIISFYSIDETRFTRIEQLKCKPYFVSPRSWGLFQRRTKLLCRKCGNHVGNAYQPGVQISGSRSLKRKDYSVSESTSSAPTFSSSWGWDGISGAGSFDIRIRALQPSSYDGSNIFEMIRY*

Click here to download the sequence:
Link to NCBI Protein BLAST