Transcript Information: R_Transcript_188096.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2734623921897
Replicate 20
Replicate 30.79907224172625
Condition 2: 8 Hour
Replicate 10.85415807955506
Replicate 23.3801333015746
Replicate 32.1106523977194
Condition 3: 24 Hour
Replicate 11.8686587278364
Replicate 20.51291299745529
Replicate 31.2725409701685


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188096.p1 GENE.R_Transcript_188096~~R_Transcript_188096.p1 ORF type:internal len:86 (+),score=15.40,PPR_2|PF13041.2|7e-13,PPR_2|PF13041.2|8.2e-08,PPR|PF01535.16|2e-07,PPR|PF01535.16|1.9e-05,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|8.8e-06,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|2.2 R_Transcript_188096:1-255(+)
GTAATGATAAAAGGACTTTCTAAGAAGGGGCTGTTAGATCAGGCTCATGAATTATTCAAGAAGATGGAGGAGCATGGCTGTTTTCCGGATCGTTGTTCCTACAATACACTCATTAGGGGTTTCCTTTGCAACAACCAAATCTCAAAGGGCCTGCAGCTTATTGAAACTATGACTAGCAGAGGTTTTGAAGCAGATGCTGGAACTTTGTCTTTATTCCTTGACTTGCTTACAGACAATCATGTTGACAAGTCAGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188096.p1 GENE.R_Transcript_188096~~R_Transcript_188096.p1 ORF type:internal len:86 (+),score=15.40,PPR_2|PF13041.2|7e-13,PPR_2|PF13041.2|8.2e-08,PPR|PF01535.16|2e-07,PPR|PF01535.16|1.9e-05,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|8.8e-06,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|2.2 R_Transcript_188096:1-255(+)
VMIKGLSKKGLLDQAHELFKKMEEHGCFPDRCSYNTLIRGFLCNNQISKGLQLIETMTSRGFEADAGTLSLFLDLLTDNHVDKSV

Click here to download the sequence:
Link to NCBI Protein BLAST