Transcript Information: R_Transcript_188098.p1


Annotated TAIR IDAT3G54980.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20370293-20372848 | Forward length=851
E-Value1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3093722195715
Replicate 20
Replicate 30.19412489488265
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188098.p1 GENE.R_Transcript_188098~~R_Transcript_188098.p1 ORF type:5prime_partial len:118 (+),score=22.16,PPR_1|PF12854.3|5.2e-12,PPR_1|PF12854.3|2.5e-15,PPR_1|PF12854.3|3.2e-10,PPR_1|PF12854.3|5.8,PPR_2|PF13041.2|4.5e-19,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|2.7e-12,PPR|PF01535.16|3.9e-09,PPR|PF01535.16|2.7e-11,PPR|PF01535.16|4.9e-08,PPR|PF01535.16|2e+03,PPR_3|PF13812.2|1.5e-06,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|4.2e-07 R_Transcript_188098:3-356(+)
GTACATACATATAACACTCTCATAGACGGCTTGTGCAAGGTTAATAGACTTGAATGTGCACTTCAACTCTTCAAAGAGATGCAAGCTGCTCAAGGGATAACTCCAGATGTTGTCACCTATACTTCGTTGTTGTATGGCCTGTGTAAAAATGGACAACTTGATGAGGCTGTAGCAATGTTTAAAGAGATGGTAAATAATGGTGTGGTAAAGGATCTTGTGAGCTACAATGTGTTAATTGATGGTATGTGTGAAAGGGGGAGATGGAAAGAGGCATCAAATGTCTTCTCCAAGATGATGTACAAGGGGTTGCTGCCAAATTGTACAATTCACACTGCAATGATCAAAGGGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188098.p1 GENE.R_Transcript_188098~~R_Transcript_188098.p1 ORF type:5prime_partial len:118 (+),score=22.16,PPR_1|PF12854.3|5.2e-12,PPR_1|PF12854.3|2.5e-15,PPR_1|PF12854.3|3.2e-10,PPR_1|PF12854.3|5.8,PPR_2|PF13041.2|4.5e-19,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|2.7e-12,PPR|PF01535.16|3.9e-09,PPR|PF01535.16|2.7e-11,PPR|PF01535.16|4.9e-08,PPR|PF01535.16|2e+03,PPR_3|PF13812.2|1.5e-06,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|4.2e-07 R_Transcript_188098:3-356(+)
VHTYNTLIDGLCKVNRLECALQLFKEMQAAQGITPDVVTYTSLLYGLCKNGQLDEAVAMFKEMVNNGVVKDLVSYNVLIDGMCERGRWKEASNVFSKMMYKGLLPNCTIHTAMIKGL*

Click here to download the sequence:
Link to NCBI Protein BLAST