Transcript Information: R_Transcript_188101.p1


Annotated TAIR IDAT1G12700.1
Annotated Gene NameATP binding;nucleic acid binding;helicases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4323722-4326227 | Reverse length=735
E-Value1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2344997747153
Replicate 21.0143140297728
Replicate 30.88528454477884
Condition 2: 8 Hour
Replicate 11.8926272422991
Replicate 20.97221225396459
Replicate 30.78920046175596
Condition 3: 24 Hour
Replicate 11.5527019381056
Replicate 20.4261885775957
Replicate 32.0090163722273


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188101.p1 GENE.R_Transcript_188101~~R_Transcript_188101.p1 ORF type:5prime_partial len:207 (+),score=41.28,PPR_2|PF13041.2|1.4e-18,PPR_2|PF13041.2|2.6e-11,PPR_2|PF13041.2|4.4e-15,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|1.6e-08,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|6.4e-15,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|6.1e-10,PPR_1|PF12854.3|1.3e-06,PPR|PF01535.16|9.7e-09,PPR|PF01535.16|7.1e-11,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|9.2e-09,PPR|PF01535.16|5.2e-05,PPR_3|PF13812.2|4e-06,PPR_3|PF13812.2|3.1e-05,PPR_3|PF13812.2|9.1e-06,PPR_3|PF13812.2|0.00056,PPR_3|PF13812.2|22,MRP-S27|PF10037.5|0.00025,MRP-S27|PF10037.5|14,MRP-S27|PF10037.5|3.5e+02 R_Transcript_188101:3-623(+)
GTACATACATATAACACTCTCATAGACGGCTTGTGCAAGGTTAATAGACTTGAATGTGCACTTCAACTCTTCAAAGAGATGCAAGCTGCTCAAGGGATAACTCCAGATGTTGTCACCTATACTTCGTTGTTGTATGGCCTGTGTAAAAATGGACAACTTGATGAGGCTGTAGCAATGTTTAAAGAGATGGTAAATAATGGTGTGGTAAAGGATCTTGTGAGCTACAATGTGTTAATTGATGGTATGTGTGAAAGGGGGAGATGGAAAGAGGCATCAAATGTCTTCTCCAAGCTGATGTCCAAGGGCCTGCAGCCAAATTGTAGAAAATATAATGTAATGATGAAAGGACTTTGTAAGAAAGGGCTCTTAGATAAGGCTGATCAACTATTGCAGAAGATGGAAGAGCATGGCTGCTTACCAAATGCTGTTACCTACAACACACTTATTAGGGGGTTCCTTTGCAACAATGAAATCACAAAAGGCCTGCAGCTTATTAATGTGATGACTAGCAGAGGTTTCCAAGCTGATGCTGCAACTTCATCTCTTTTCCTTGACCTGCTTTCAGACGATCGCGTAGACAAGTCAGTAAAGGAGCAGCTTCACAAATTTTTGAAGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188101.p1 GENE.R_Transcript_188101~~R_Transcript_188101.p1 ORF type:5prime_partial len:207 (+),score=41.28,PPR_2|PF13041.2|1.4e-18,PPR_2|PF13041.2|2.6e-11,PPR_2|PF13041.2|4.4e-15,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|1.6e-08,PPR_1|PF12854.3|1.3e-11,PPR_1|PF12854.3|6.4e-15,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|6.1e-10,PPR_1|PF12854.3|1.3e-06,PPR|PF01535.16|9.7e-09,PPR|PF01535.16|7.1e-11,PPR|PF01535.16|6.4e-07,PPR|PF01535.16|9.2e-09,PPR|PF01535.16|5.2e-05,PPR_3|PF13812.2|4e-06,PPR_3|PF13812.2|3.1e-05,PPR_3|PF13812.2|9.1e-06,PPR_3|PF13812.2|0.00056,PPR_3|PF13812.2|22,MRP-S27|PF10037.5|0.00025,MRP-S27|PF10037.5|14,MRP-S27|PF10037.5|3.5e+02 R_Transcript_188101:3-623(+)
VHTYNTLIDGLCKVNRLECALQLFKEMQAAQGITPDVVTYTSLLYGLCKNGQLDEAVAMFKEMVNNGVVKDLVSYNVLIDGMCERGRWKEASNVFSKLMSKGLQPNCRKYNVMMKGLCKKGLLDKADQLLQKMEEHGCLPNAVTYNTLIRGFLCNNEITKGLQLINVMTSRGFQADAATSSLFLDLLSDDRVDKSVKEQLHKFLKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST