Transcript Information: R_Transcript_188138.p1


Annotated TAIR IDAT3G19380.1
Annotated Gene Nameplant U-box 25
Annotated Gene Symbol(s)PUB25
Annotation TypeHomolog
Chromosome Positionchr3:6714602-6715867 | Reverse length=421
E-Value8E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8654598751374
Replicate 24.9343823520317
Replicate 37.1411891786566
Condition 2: 8 Hour
Replicate 14.814966248619
Replicate 27.5072504982398
Replicate 39.6199183383825
Condition 3: 24 Hour
Replicate 16.6616179245856
Replicate 26.505508018084
Replicate 37.5058555640919


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188138.p1 GENE.R_Transcript_188138~~R_Transcript_188138.p1 ORF type:complete len:417 (+),score=78.44,U-box|PF04564.11|7.2e-19 R_Transcript_188138:188-1438(+)
ATGAGGGAAATGGAGATGTCAATTATTCCTCACTTGTTCTTATGCCCAATTAGCCTAGAATTGTTCACTGATCCAGTGACTTTATGCACTGGACAAACCTATGACAGGCCCTGCATTGAGAAGTGGCTTTCTGCTGGTAACTTAACTTGTCCTGTTACAATGCAGAAGCTTCATGATATGGCTTTGGTTCCTAATCATAATCTTAAGCATTTGATTGATCAATGGCATCAAATGGTTCAACTTCATCACCAGTTTGATGATCCTGAGGTGGGTTCAGCTTCTAATGTTTCTTTAACTTGTTTGAAACACACACTTGAATCACAGGACTCAAGTTCTGAGCAGAAGATACTTGCACTAGAGAAAATCAGAAGCTTGTCAGAGGAGTTGCCCAACAAAAGTGAAGGTTTAGTCCAATTGGGTTTCTTTCCTTTGATTTTGGGTTTGGTTTTTGGACCACAATCAAACCAACAAATGATGGGTTTGGTAGAAAAAGCACTTGATTGTACCCTCAAGTTGATGCCATTTTGTTACTTGGGATATCTAAATATGCTCATGGAAGAGTCCAAGTTTGAAAAATTCAAAGTTTTATTCCAAGAGGGAACTTCCCTAGTCAAAAAGAGCTTGTGCCACCTTATAGAAGCCATTTTCATTTCATCATCTTTGGAAACAAAAGAGTTAGCTACTAAGATTGGAAATGACTCCAAATTACTACAAGAGTTAATCCATTCTCTCCATGATTACCAACAAAATCCTGAGGTTTCGGAAGCCGGGATTAAGGCAATCTTAAGCTTGTTATTATCATCAAGCAACACAAGTACACAAGCAATAACATACCGCGAAAATTTGGTTAAACAAGGGTTAGTACATTCATTAGTGGCATACATTATGGAAGTGGAGAAGCAAGAAAAGAATTTAGCACCAAAAGCAACAAGGGCACTTGAGTTACTCTTAGAGTCAAAAAGTGGTAAAGAGGCCTTTTCAATGAATGAGGTCCCAAATGGTGTAAAAGCACTTGTGAAGATGGTGTTTAGAGTGTCAGGGGATGATGAAGGAAGTGAAAGTGCTGTAAATTCACTCATGATTTTGTGTTGTGAATCATTGGAGATAAGAGAAGCAGCAATTTGTGGAGGAATTTTGACACAATTGTTGTTGTTGTTACAAAGTCAGTGTAGTGGGAGGGCCAAGACAAAGGCCAGGATGCTGTTAAAGTTGCTTAGAACCATGTGGTCTAAAGATCTTAAGCATGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188138.p1 GENE.R_Transcript_188138~~R_Transcript_188138.p1 ORF type:complete len:417 (+),score=78.44,U-box|PF04564.11|7.2e-19 R_Transcript_188138:188-1438(+)
MREMEMSIIPHLFLCPISLELFTDPVTLCTGQTYDRPCIEKWLSAGNLTCPVTMQKLHDMALVPNHNLKHLIDQWHQMVQLHHQFDDPEVGSASNVSLTCLKHTLESQDSSSEQKILALEKIRSLSEELPNKSEGLVQLGFFPLILGLVFGPQSNQQMMGLVEKALDCTLKLMPFCYLGYLNMLMEESKFEKFKVLFQEGTSLVKKSLCHLIEAIFISSSLETKELATKIGNDSKLLQELIHSLHDYQQNPEVSEAGIKAILSLLLSSSNTSTQAITYRENLVKQGLVHSLVAYIMEVEKQEKNLAPKATRALELLLESKSGKEAFSMNEVPNGVKALVKMVFRVSGDDEGSESAVNSLMILCCESLEIREAAICGGILTQLLLLLQSQCSGRAKTKARMLLKLLRTMWSKDLKHV*

Click here to download the sequence:
Link to NCBI Protein BLAST