Transcript Information: R_Transcript_188208.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22959699314112
Replicate 20.13205220387609
Replicate 31.2966077884615
Condition 2: 8 Hour
Replicate 10.30799830122321
Replicate 20.28126895397718
Replicate 30.45664429233678
Condition 3: 24 Hour
Replicate 10.86633234821525
Replicate 20.97098624046567
Replicate 30.13765852004338


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188208.p1 GENE.R_Transcript_188208~~R_Transcript_188208.p1 ORF type:complete len:159 (+),score=16.01,RVT_1|PF00078.23|1.7e-08 R_Transcript_188208:804-1280(+)
ATGAAGTTGTGCAGTAGAGGTTGGCTTACACATCTTATCTTTGCAGATGATCTTTTAATATTTGCAAGAAGAGATGTACCATCTGTTAATGAAGCTGTGGTTTGTGTGAATAAGTTCTACCATATGTCTGGGTTGTTCATCAATCCACAAAAGACTAGTATATTCTTTGGAGGGGTGGACAAACAAGTAAAGAAGGAGATCTTAAATAGCACAGGATTCAGGGAGGGAAAACTGCCTGTCAGATATTTAGGCTTACCCCTTAGCACTTCTAGCGTTACAGTCAAGATGTGTAGAGGATTGGTGGAGAAGATCAAAATTAAACTTCATCATTGGACTACCAAAACGTTGTCCTATGCAGGCAGCTTGGAGCTTGTGAATTATGTGATTTTCGGGCTGGACAGTTTCTGGTGTAGTGTGTTCTTGTTGCCAAAAGGAGTTACAGACACAATCCAAAAGTTATGCAGAAAATTCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188208.p1 GENE.R_Transcript_188208~~R_Transcript_188208.p1 ORF type:complete len:159 (+),score=16.01,RVT_1|PF00078.23|1.7e-08 R_Transcript_188208:804-1280(+)
MKLCSRGWLTHLIFADDLLIFARRDVPSVNEAVVCVNKFYHMSGLFINPQKTSIFFGGVDKQVKKEILNSTGFREGKLPVRYLGLPLSTSSVTVKMCRGLVEKIKIKLHHWTTKTLSYAGSLELVNYVIFGLDSFWCSVFLLPKGVTDTIQKLCRKFI*

Click here to download the sequence:
Link to NCBI Protein BLAST