Transcript Information: R_Transcript_188243.p1


Annotated TAIR IDAT5G49410.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20032901-20033751 | Forward length=145
E-Value3.6E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8320778813155
Replicate 26.4343501275752
Replicate 36.2808796634611
Condition 2: 8 Hour
Replicate 16.9113328480128
Replicate 28.1148361520432
Replicate 39.2221892668095
Condition 3: 24 Hour
Replicate 18.3314623003765
Replicate 26.9367346510687
Replicate 36.3544949090992


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188243.p1 GENE.R_Transcript_188243~~R_Transcript_188243.p1 ORF type:complete len:124 (+),score=16.17 R_Transcript_188243:258-629(+)
ATGGTGTTTAGAACAGCGATGAGAATGATGACGGCAAAGAAGCCAAAGCCAAAGATGAAGCCAATTGAACTCCAAACTCAACCTCAGCAAACTCAAACTATCACTCGTGCCCTCTTTGACATTGTCAAGGAACACGGCCCTCTCACCATCGCCCAAGCCTGGGATCGCATTCAGGAAGTTGGTTTGAAGGATCTGACAAGCAAAACACACATGAAAACCGTAATGAGGTGGATGAGGGAGAGACAGAAACTTCGACTGATTTGCAACCATGTTGGTTCTCAGAAACAATTTCTGTATACTACCTGGTTCACAAAGCCAAACATCGATCCGGCAAAGCCCCCAAATCACAATTCAAAGCCAATAGGAAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188243.p1 GENE.R_Transcript_188243~~R_Transcript_188243.p1 ORF type:complete len:124 (+),score=16.17 R_Transcript_188243:258-629(+)
MVFRTAMRMMTAKKPKPKMKPIELQTQPQQTQTITRALFDIVKEHGPLTIAQAWDRIQEVGLKDLTSKTHMKTVMRWMRERQKLRLICNHVGSQKQFLYTTWFTKPNIDPAKPPNHNSKPIGR*

Click here to download the sequence:
Link to NCBI Protein BLAST