Transcript Information: R_Transcript_188364.p1


Annotated TAIR IDAT1G14790.1
Annotated Gene NameRNA-dependent RNA polymerase 1
Annotated Gene Symbol(s)RDR1, ATRDRP1
Annotation TypeHomolog
Chromosome Positionchr1:5094317-5097817 | Reverse length=1107
E-Value9E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6699074935413
Replicate 22.6661968782601
Replicate 33.0299917455228
Condition 2: 8 Hour
Replicate 11.5546580918886
Replicate 22.4845424267984
Replicate 34.8020133916368
Condition 3: 24 Hour
Replicate 13.8870361443732
Replicate 21.750417372268
Replicate 34.7481264135597


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188364.p1 GENE.R_Transcript_188364~~R_Transcript_188364.p1 ORF type:internal len:189 (-),score=23.93 R_Transcript_188364:3-566(-)
TGGAGAAGATCATATGCTATTGTGCAATTCACGAGGGCTGGAGAGGCAGAACGTATTTTGTCCTTAGGCTTACCGCCTAAGAAACTATGGTATGGCTCTAGCTATTTGCAGGTTCGAGTGATGGAAAGAGATATCGTGCCCAAGCCAAGAAAGTATCAGCATAAAATGACAAATGTGACGCTTCATTTTGGATGTCAGATCTCAAATGACAAGTACCTCTGGTTCTCGAAGGGACAGGATGTTTCTCTATTATTTGGCTATGGGATGAGGAAACTTTACTTCTTCTTGCGTCATATTCGCAAAGAATATAAACTTGAGCTTTCTTATGAGAGTATTTGGCAAATTGAGCTACGGCGTCCACGCAGTATTCGACTGAAATATCTTCTAATTCAGCTATTTAGGGTTCCTCAAGTTTATGAGAAAGTTGAGCATTCCTTTGGGCAACTCTTTGAAAATAATTTTTTCAGAGACCAGCAAGATGATCAATGGATCAGAACAACAGACTTCACCATAAGTTGTATTGGAGAGTCATCAGTTTTGTGTTTAGAGCTTCCATCTGACTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188364.p1 GENE.R_Transcript_188364~~R_Transcript_188364.p1 ORF type:internal len:189 (-),score=23.93 R_Transcript_188364:3-566(-)
WRRSYAIVQFTRAGEAERILSLGLPPKKLWYGSSYLQVRVMERDIVPKPRKYQHKMTNVTLHFGCQISNDKYLWFSKGQDVSLLFGYGMRKLYFFLRHIRKEYKLELSYESIWQIELRRPRSIRLKYLLIQLFRVPQVYEKVEHSFGQLFENNFFRDQQDDQWIRTTDFTISCIGESSVLCLELPSDC

Click here to download the sequence:
Link to NCBI Protein BLAST