Transcript Information: R_Transcript_188450.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value4E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40393827838935
Replicate 20.43560789245432
Replicate 30.69702382726882
Condition 2: 8 Hour
Replicate 10.50800549683081
Replicate 20.37113496831843
Replicate 30.65275501539428
Condition 3: 24 Hour
Replicate 10.41279598058112
Replicate 20.45757798528169
Replicate 30.36328140559166


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188450.p1 GENE.R_Transcript_188450~~R_Transcript_188450.p1 ORF type:complete len:723 (+),score=69.69,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|8.9e-14,RVT_3|PF13456.2|8.7e-12 R_Transcript_188450:150-2318(+)
ATGATGCTCAAGGCCCAGGACGAAGGGGTGGTGAAGGGAATCAAAGTGGCCCGAAACGCAATGGCTATCTCTCATCTCCTTTTTGCTGATGATGCAGCGTTCTTTTTCAAAGGGGGTCTTCAGGAGTGTGGGGCAGTTAAAAGGATTCTGGACGATTATTGTTCAGTCTCAGGTCAAATTATCAATTTGGACAAATCCATTATGATTACAAGCCCTAATACACACCCAAGATCAAGAAGAAGGTTCAAGCGTATTGTAAAGATGAAGCTAGCAAAAGATCTGGGAGTATACTTGGGAATTTCAACAGATTTTGGGGAAACAAAATCATCTCTGTTTGGGAATGTGGTGGACAAGGTCACCAACAAGCTTAAACAATGGAACTCTCTTTTTCTAACTCCAGCTGGGAGACTCACACTTATCAATGGGGCGCTTGGTTCTCTTTCGACGTTTTTGCTTTCGGCATTCCGAATTCCAGTGAGTATCACCAAAAAAATCAATTCCCTCACTGCAAATTTTTGGTGGGGCGCTCGTGGTGATACTCCGACTATTCATTGGCGAAGGTGGAGTGTGATTTCTCAATCACGTGGTCGGGGTGGATTAGGAATAAGAGATGTTAGGTTGTTCAATCAAGCTTTGTTAGCCAAACAAGGATGGCGTATCCTCACCAAGCCCACTTCTCTTTTAGCTAGAGTTTTGGGTGCTAAATACCATCTTACTCCTGAAACTTTCATGAGGAAAGAATATGTGCAGAATGGCCCTTGTTCTTGGGGATGGCGTGGTATCAAGTGGGGTTTGGAAATTCTTCACCAAAACTGTGCTTGGAGAGTCAAGAACGGGCGCTCAATTAGAGTTTGTCAGGATCGGTGGGTTCAGGGGGAAGTGCCAAGGATGTGTGATGATCTTCAGGTAAGAGGAACTGAACTTATCGCAGAAGGCCCAGATAAAGTATCAGACTTTATTGTTTCCCAATCCTGGAATGTCCTACTTCTGGGAGTTTTTTTCAATGAATCGTGGGTTAATAAAATTAGAGCTATAACGCTCCCTGTCTTAAGTAGGAAAGATGAGCTGGTGTGGTTAGGGAATAGATATGGTATTTATAGGGTGGCATCAGGCTATGATTACATTACTAGGAGGAGTGATCAGCTTAATAGGAGGGAGCAGAGTTTGCAAATTCCATGGCCAAGTTTCTGGGGGATGGACATCAATCCCAAGTGGAAGGTTTTCCTTTGGAAAATCTTTCATAATGCCCTGCCCACAGGTGAACAATTGAAGAAAAGAAATATTCATAGTAACATCTACTGTACAAGGTGCTCATCGGTTGGGGGGACTTCTACTATGGAAACTCTCAATCATCTGTTTCGGGACTGTGAATTCACAAAAAGGATCTGGGCTTCTTGCAAGTTAGGGGTAAGAGTGGAGGGGAGTGAATACATTCCGGTGCAAGGCTGGATTTGGAGCTGGTTATCCTACTTAACCAAGCAGGAGGAGAACACATTTCATGGAATGATATATTTCATTTGTGTTCTCTGGAATATTTGGACCTCTCGGAATGATTTAGTTTTCAATCAAAAGCTTTTACATCCCAAGGTAATTTTAACTATGGTTGAGAATCTCTATTCGGAGTTTGTGAGAACGAGGCAGATTACAGATCCAGTGAAGGGGACGCTGTTGAAAGGGCCAGCCTCACAGGAGGCTGCTTCTAATTGTCGTACGGCTGCTTTCTCGGTACCAAATACAAGTGTTGTTCCTAATGCGGTGGTGATTTTTTTTTATGGTGCCTGGGATAAAACTACCTTTAAAGGAGGTACAGGATGGTCGGCCATAGTTATGAATCACCCTTTAAGAGTTCGTCAAGGGGGAGCACGTAAATGTTACGCAGAAAGCGCTCTTCACAGTGAAGCGCTGGCGGCCCTATATGCACTACGATGGGCACATGAACTGAACTTACGTAATGTTGCTCTGCTATCGGATTGTGAGGAGCTTGTCAAGCTGCTCAATACTCCAGGAAGTGGTCCAGTTGAAGTCCAAGAGGACCTGACGAGTATCCTTTTCTTAGTATCAAAGTTTTGTAATTGTACTTTTAAAGTAATTCCTAGAAAACTCAATATCCGTGCTCATATTTTGGCCTCTCGTGCCAAAAATGAAGAGTGGGATGTTCTTAGGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188450.p1 GENE.R_Transcript_188450~~R_Transcript_188450.p1 ORF type:complete len:723 (+),score=69.69,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|8.9e-14,RVT_3|PF13456.2|8.7e-12 R_Transcript_188450:150-2318(+)
MMLKAQDEGVVKGIKVARNAMAISHLLFADDAAFFFKGGLQECGAVKRILDDYCSVSGQIINLDKSIMITSPNTHPRSRRRFKRIVKMKLAKDLGVYLGISTDFGETKSSLFGNVVDKVTNKLKQWNSLFLTPAGRLTLINGALGSLSTFLLSAFRIPVSITKKINSLTANFWWGARGDTPTIHWRRWSVISQSRGRGGLGIRDVRLFNQALLAKQGWRILTKPTSLLARVLGAKYHLTPETFMRKEYVQNGPCSWGWRGIKWGLEILHQNCAWRVKNGRSIRVCQDRWVQGEVPRMCDDLQVRGTELIAEGPDKVSDFIVSQSWNVLLLGVFFNESWVNKIRAITLPVLSRKDELVWLGNRYGIYRVASGYDYITRRSDQLNRREQSLQIPWPSFWGMDINPKWKVFLWKIFHNALPTGEQLKKRNIHSNIYCTRCSSVGGTSTMETLNHLFRDCEFTKRIWASCKLGVRVEGSEYIPVQGWIWSWLSYLTKQEENTFHGMIYFICVLWNIWTSRNDLVFNQKLLHPKVILTMVENLYSEFVRTRQITDPVKGTLLKGPASQEAASNCRTAAFSVPNTSVVPNAVVIFFYGAWDKTTFKGGTGWSAIVMNHPLRVRQGGARKCYAESALHSEALAALYALRWAHELNLRNVALLSDCEELVKLLNTPGSGPVEVQEDLTSILFLVSKFCNCTFKVIPRKLNIRAHILASRAKNEEWDVLRF*

Click here to download the sequence:
Link to NCBI Protein BLAST