Transcript Information: R_Transcript_188477.p1


Annotated TAIR IDAT2G25930.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)ELF3, PYK20
Annotation TypeHomolog
Chromosome Positionchr2:11059459-11063178 | Forward length=695
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3011843818875
Replicate 24.8355116110262
Replicate 35.1366623700463
Condition 2: 8 Hour
Replicate 13.7099795374614
Replicate 26.0984223203233
Replicate 36.0505368734623
Condition 3: 24 Hour
Replicate 14.1741467686735
Replicate 23.0743694211108
Replicate 34.1122354260231


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188477.p1 GENE.R_Transcript_188477~~R_Transcript_188477.p1 ORF type:internal len:165 (-),score=27.42 R_Transcript_188477:1-492(-)
CCGAATCCCCACTATCAAGGCATGGGAATGCCACAGCCTATTCCTTATGGTGGACAAGGCTATTTTCCTGGATATGCCATGCCCCTAATGAGCCCAGTTATGTCGGGCTCAGCTGTGGATAAAATGAACCAGTTCTCTGGGCCCAACCTGTATGGCCAAACCAGTCAGCCAGCAACAGGGAGTGTCAACCAAAGTTTACAAAATCAGAACTCATGCAATATGTCTGGTCAAAAGAATCGGACTGCTGCAATAGCCCTGCCTTCTAGAGATGTTGACCGACAAGGGATTACTGCGAGTAGCCCTAGTGAGAGAGCACAGGGAACTGCGATGCCTGTGCAAACCGAAGGAAGAGATGCCCTTCCCCTTTTCTCCACAGCTCCTACCACTGAAATCTCCGAGGGACCTCTTCCAACAGAAAAGGCGTCAAGGGTAATTAAAGTTGTTCCACACAATCCTAAATCTACAAGGGAATCTGCAGCTCGTATCTTCCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188477.p1 GENE.R_Transcript_188477~~R_Transcript_188477.p1 ORF type:internal len:165 (-),score=27.42 R_Transcript_188477:1-492(-)
PNPHYQGMGMPQPIPYGGQGYFPGYAMPLMSPVMSGSAVDKMNQFSGPNLYGQTSQPATGSVNQSLQNQNSCNMSGQKNRTAAIALPSRDVDRQGITASSPSERAQGTAMPVQTEGRDALPLFSTAPTTEISEGPLPTEKASRVIKVVPHNPKSTRESAARIFQ

Click here to download the sequence:
Link to NCBI Protein BLAST