Transcript Information: R_Transcript_188605.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6552930277564
Replicate 20.92630737130727
Replicate 31.4035991174113
Condition 2: 8 Hour
Replicate 11.3803306220261
Replicate 21.4797642394902
Replicate 31.9130373938153
Condition 3: 24 Hour
Replicate 11.8006123315846
Replicate 21.5676532054577
Replicate 31.9849143956255


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188605.p1 GENE.R_Transcript_188605~~R_Transcript_188605.p1 ORF type:complete len:408 (+),score=57.16,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|2.3e-16,zf-RVT|PF13966.2|2.3e+03,zf-RVT|PF13966.2|3e+03 R_Transcript_188605:1954-3177(+)
ATGAATAGAAACAAATCTGCTATGTATTTAGGTGGTGTGGAGCAGCAGACAAAGGTTGTTCTGGAGCAGATGACTGGTGTGACAATTGCCTCTCGTCCTTTCTCTTATTTGGGAGTACCAATTACATCTAAAAGATTATCAGTTGGTAACTGTGACTATTTAGTTGAGAAGTTGACAACTAGAATAAGACAATGGAGATCTAAGCATTTGTCTTATGCTGGTAGAGTAATCTTGGTGAATTCTGTATTGTTGAGCATGCATACCTATTGGGCTAGAGTCTTCCTAATTCCTAAAACCGTTCTTAGGAAGGTTATGGCTATTAGTAGGAACTTTCTTTGGTCTGGATCTGATCAGTTTCAAAGTTCTCCTCCTGTAGCTTGGGATTTCATCTGTAAAAAGAAGAAATATGGGGGACTTGGTCATAAGGAGTGTATTACCTCAAACATTGCTGCCTCGGGGAAATATGTGTGGGCTGTGGCATTAAAAGAAGACTCTCTTTGGGTGAAGTGGGTGCATAATATCTATATTAAGGAGACGGACTGGTGGTTGCATAAACCACCAGTAGGAGCTAGTTGGGCTTGGAAAACAATCTGCCAGGTTAGGGAGACTCTCAGAGATGGGTTTGATGGTGCTATTTGGAAGGATTCTTCAAAGGGGATGTATAGTATGGCCAGTGGCTATGCTTGGCTCAGAAAAGAGAGCGACAAATTTCAATGGGATAAGTTGGTTTGGAATAGATACAATGTACCCAAACACTCCTTTATAGCCTGGATGATTATGCTTGGTAAGATCAAGACTAGTGATCTTCTTCTAAAGTGGGGACTTAATATTGCAGCAGAATGCCCCTTATGTGAAGGTGACAGGGAATCCGTTGCCCATCTCTATTATGATTGTCCATTTAGCAAAATAATTCTGCAAATGTTTTGCACTTGGATGAGTATGCCTTTGAGGAGCTGGACTTTATATACTTTAGCAAAATGGGCCATGTGTAAGTATAAAATATCTAAACTTGGCAGGAAAGTACTCTATGCAGGAGTTGTAGGGATGATGTACTTTATCTGGAGGACAAGAAATGCTGCTGTGTGGGAAAAGAAGGTGACTATACCTGACAAAGTTTTCAAGGAGCTAAAACTGAAGGTGCAACAAAGGATAAGGTGCTGTTTGCCTGCAAAGCTCAGTAAGCAGGATGAGAAAATGTTAGCCAGCTTCCTTAAAATTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188605.p1 GENE.R_Transcript_188605~~R_Transcript_188605.p1 ORF type:complete len:408 (+),score=57.16,zf-RVT|PF13966.2|1.5e+04,zf-RVT|PF13966.2|2.3e-16,zf-RVT|PF13966.2|2.3e+03,zf-RVT|PF13966.2|3e+03 R_Transcript_188605:1954-3177(+)
MNRNKSAMYLGGVEQQTKVVLEQMTGVTIASRPFSYLGVPITSKRLSVGNCDYLVEKLTTRIRQWRSKHLSYAGRVILVNSVLLSMHTYWARVFLIPKTVLRKVMAISRNFLWSGSDQFQSSPPVAWDFICKKKKYGGLGHKECITSNIAASGKYVWAVALKEDSLWVKWVHNIYIKETDWWLHKPPVGASWAWKTICQVRETLRDGFDGAIWKDSSKGMYSMASGYAWLRKESDKFQWDKLVWNRYNVPKHSFIAWMIMLGKIKTSDLLLKWGLNIAAECPLCEGDRESVAHLYYDCPFSKIILQMFCTWMSMPLRSWTLYTLAKWAMCKYKISKLGRKVLYAGVVGMMYFIWRTRNAAVWEKKVTIPDKVFKELKLKVQQRIRCCLPAKLSKQDEKMLASFLKIA*

Click here to download the sequence:
Link to NCBI Protein BLAST