Transcript Information: R_Transcript_188655.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.265056699832
Replicate 20.97012609184216
Replicate 31.2473966017707
Condition 2: 8 Hour
Replicate 10.84852007242929
Replicate 21.6973606678128
Replicate 31.527610794785
Condition 3: 24 Hour
Replicate 11.3638301323389
Replicate 21.4193978493936
Replicate 31.5892062808968


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_188655.p1 GENE.R_Transcript_188655~~R_Transcript_188655.p1 ORF type:complete len:606 (+),score=99.08,RVT_3|PF13456.2|2.1e-16,zf-RVT|PF13966.2|6.1e+03,zf-RVT|PF13966.2|1e+04,zf-RVT|PF13966.2|8.2e-16 R_Transcript_188655:630-2447(+)
ATGCTTGGACGATCAAAGAGAAGCCTCTATAGACCACTAAAAGAGCGGTTGTGGAAGAAATTGCAAGGTTGGAAAGGTATGCTGTTATCTAAAGCCGGTAGGGAGATTATGATAAAGGCAGTGGCCCAATCGATCTCTACCTATGCAATGAGTGTGTTTAAATTTTCAGCAGCCTTTTGCGAGGAGGTTCGGTCTATGGTATCACTGTTCTTCTGGGGGCAGAAAAAAGAGGAAAGGAAAGTCCATTGGGTTGCTTGGAGGAAGTTATGTAGTCCGAAGGGGAAAGGAGGCATGGGGTTTTGGGATCTTAAACTGTTCAATTGGGCCCTTCTTGGAAAACAGGCTTGGAGGTTGACTCAGGGAGGAGGAGGGTTGCTGGGACAACTTTACAAAGCAAGATATTACCCGCATGGGGATTTTTTGTCTTCGGAGTTGGGGTCAAATCCGAGTTACACTTGGAAGGGTATTTGGGAGGCGAAATGGGTGATTCGTAAAGGTATGAGATGGAGAATTGGGGACGGAGCTGAGGTGAGGGTGTGGGATGATTCATGGCTGGGAGGGGGTGGCTCGGGACGCATTATTACGCCCAGAAGCACCACTGATCCAGGTATGAGAGTTTCTCAGTTGATACTTCCAAACACAAAGGAATGGAATGTGGATTTTCTGAAGACCGTCTTCCTACAACTAGACGTGGACAGGATTAGAGCCTTACCTCTGAGCACTCGCCCTCATGCAGATGCAATTGTATGGGGTTGGGAGAAACAAGGGGACTATTCGGTCCGGAGTGCTTATCATGGGATTCTTGCTGTGAGTGAACCTGGTGACCATGCTTCTTCCTCTTATGATGATCAGAACCTGTGGAAAAAAATCTGGAGCCTTGACATGCTGCCACGAGTTAAAATGTTCATATGGCGAGTTTGTTGTGAGGCGTTACCCACGCGCTTGAATTTGCACCGCAGAATTGATGCTATAGCGCCTACTTGTGGGATTTGCTTGAAAGCAGACGAGGACTTCTCACATGCACTGTTTTGGTGTCCACGAGCAAGGGATATCTGGGAGCGGAGCGGTATCGAGGAACTTCCGGCACCAAGAGGAACTTCGGGCAGCGGTTGGGTGGATGATGTACAACGCAAGCTGACTGCAGAGGCCTTTAAGTGGTTTTGCTGGGTAGCCTGGGCTATATGGGGAGGAAGAAACCGGTGGTTGTTTCAAAATGAGTATGACTCAGCTGAGGAAGTGCTTGCATATGCCAACCGTTTCGCAAAAGCCGAGAAGGGGACAAGCTTGAACAAGTGTGGTACTAAAGTCTCTCTACCTGACAGATGGAAGGCCCCAGCTTGTGGTACAATAAAGGTGAATGTGGATGCTGGAAAGCTTGGTGAATCAGCTACTGGAATCGGCATTATCTGTAGAAGAGATGATGGCAGTCCACTGGTCGGTGCTACATATATTTTTGAAGAAAATTGGCCTGTTGAAGTTGCTGAACTTAAGGCCATTTTGCTGGGAATTCAATTGGCATATGCTTTTGATGCTGTGAATATTGAAGTGGAAACTGACAATCTGGGTGCTTACAAGGCTTTGTCCAACAAAGCTACTGGCCGTAGCTATTTTTATTTACTTATTGATGATATTTTAGATTTTTCATCTGTGTTTAGTTCAGTTAGTTGGTCTTTTGTTAAACGTTCTGATAATCGAGTAGCTCATGCATTAGCCCATGTAGGTCCTTGGGAAGTAGGTGTTCGATACTGGGAAATGGAGTTTCCTCCTAGTATTACTGAGTTGTTAGTTTCTGATGTTGCAGCTATTAATGAAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_188655.p1 GENE.R_Transcript_188655~~R_Transcript_188655.p1 ORF type:complete len:606 (+),score=99.08,RVT_3|PF13456.2|2.1e-16,zf-RVT|PF13966.2|6.1e+03,zf-RVT|PF13966.2|1e+04,zf-RVT|PF13966.2|8.2e-16 R_Transcript_188655:630-2447(+)
MLGRSKRSLYRPLKERLWKKLQGWKGMLLSKAGREIMIKAVAQSISTYAMSVFKFSAAFCEEVRSMVSLFFWGQKKEERKVHWVAWRKLCSPKGKGGMGFWDLKLFNWALLGKQAWRLTQGGGGLLGQLYKARYYPHGDFLSSELGSNPSYTWKGIWEAKWVIRKGMRWRIGDGAEVRVWDDSWLGGGGSGRIITPRSTTDPGMRVSQLILPNTKEWNVDFLKTVFLQLDVDRIRALPLSTRPHADAIVWGWEKQGDYSVRSAYHGILAVSEPGDHASSSYDDQNLWKKIWSLDMLPRVKMFIWRVCCEALPTRLNLHRRIDAIAPTCGICLKADEDFSHALFWCPRARDIWERSGIEELPAPRGTSGSGWVDDVQRKLTAEAFKWFCWVAWAIWGGRNRWLFQNEYDSAEEVLAYANRFAKAEKGTSLNKCGTKVSLPDRWKAPACGTIKVNVDAGKLGESATGIGIICRRDDGSPLVGATYIFEENWPVEVAELKAILLGIQLAYAFDAVNIEVETDNLGAYKALSNKATGRSYFYLLIDDILDFSSVFSSVSWSFVKRSDNRVAHALAHVGPWEVGVRYWEMEFPPSITELLVSDVAAINES*

Click here to download the sequence:
Link to NCBI Protein BLAST