Transcript Information: R_Transcript_18874.p1


Annotated TAIR IDAT5G12440.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4035891-4038604 | Reverse length=650
E-Value1.8E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.187786845787
Replicate 216.107161890789
Replicate 322.415878933378
Condition 2: 8 Hour
Replicate 119.833550607269
Replicate 222.105328905858
Replicate 324.763983060671
Condition 3: 24 Hour
Replicate 127.221399998563
Replicate 221.330586098458
Replicate 325.827491530539


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18874.p1 GENE.R_Transcript_18874~~R_Transcript_18874.p1 ORF type:complete len:700 (+),score=169.50,RRM_1|PF00076.18|2.2e-07 R_Transcript_18874:814-2913(+)
ATGGAATCCTATGAAGCAACTAGAGCAGTATTTTCGAGGGTTCAAAGTATAGATCCAGAAAATGCTTCAAAGATTATGGGTTATATACTTCTACACCATGGGGAGAAAGACATGATACGGTTTGCTTATGGACCAGAAACACTGATAGTATCAATAGTAAACAGAGCCAAAACTGACTTAGGACTTTTGTCGAACACCTCATCTGCACCAGTAGTTAGCCCTATCTCAAACCCTATTTCCATTTCTAGGCCTAACCCACTTTCTCTTTCACTTCCTTCTCCAAGATTACCCAACAATGGGTTTAACCCTTCTTCTCCTTCTTCACCCTCAGTTTGGTCTCCACACCTTTCTTTAAGCCCTAATGCAAATGCAAGTCACTCTCTTTCTTATGCTGCTGTTGTTAATGGGACTTGCAGTAACACAAATGGGTCTTTCTCATCTTCTTCAGTTGGGTCACCCCAAGTTGGGTTTACTGGGGTTAGTAGCAGCAGTCGAGAGAATTTCATAGAGGACTATCATTTGCAAGACCAAAACCTCTCCTTTCTTAGTGACCCATTAGCTATACCTGCTAAAAATGTGGACTTCTTTGAGCAAGGTATGGATTTGGCTATGAGTCCTGGTTGTAGGAGTGATTCTATGTTGTACCCATTTTGTTGGGATAACTCAGATGGTGGTGCTGAGAGTAATGCTCATTTTCATAGGAGAAGTTCTTCTTTTAATGATATGTACTATGGAACTGATGATTCAACTTCTGGGTTTGGTTTCAAGCCTTGTCTTTACTATGCTAGGGGGTTTTGCAAGAATGGGACTACTTGTAAGTTTGTTCATGGTGCTGGGTTTCCTGATTCACCTGATAATTCTTCCCCCAAGTTTGATCCCTTTGAGCAGTGCCAAGAAGAGATGTTAAGGTCAAAGTTTGCTCAGCAACAAAGAGTGGCTACTCAATTGATGGCTAGTGGGGTCAATTTACCTTATAACAAGTTAAAGTTTCTCAGAACTGAGGCTCAAAGATCTGCAGCTGCGGCATTGATGATGGGTGAGGAGTTTCACAAGTTGAACCGAGTGAGGATGTCAAGAAATGAATTTTCTGGAATGGGTTTGAGAGGAGATTCAAATCCTGGTTCTAGACAAATTTACTTGACTTTCCCAGCTGATAGCACCTTCAAAGAAGAGGATGTTTCTCAGTATTTTAGCAACTTTGGACCAGTTCAAGATGTGAGGATTCCATATCAACAGAAGAGAATGTTTGGTTTTGTTACATTTGTGTATCCTGAGACTGTCAATATGATTTTGGCCAAAGGAAACCCCCACTTTGTTTGTGATTCTCGTGTCCTTGTCAAGCCTTATAAGGAGAAAGGAAAAATTCCTTACAAGAAGCAACAACAGCAGCAGCAACTAGAAAGGGGAGATTTCTCATGCTCTAGTCCTTCTGGACTTGATTCTAGAGAGCCTTTTGACTTCCAGCTTGGGGGGAGAATGTTCTACAGTACACAAGAGATGTTGTTGAAGAAAAAGCTCGAGGAACAAGCTGATTTGCAGCAGGCCCTTGAACGACAACGTAGGAGGCTGATGAATTTGCAGCTCATGGATTTGAAGAATCATCTATATCACCAGCAGGCTGTCGGGTCTCCGGTACTATCTCCTAATCTGTCTCAATTGTCGTCAAATCTTAGTGCTCCTAACCTGTCTAATGGGACGAGCGAGGATATTTCAGAAGGAAGCGAAGAAAGTTCAACTGGAGCACCTGATCTGCAGTTAGGTGAGGGGGATAAGGCAGCTCCAGTTGTTGAGGGAAATGGCAATGTCCAAAACAAAGAGAGTCATTCCGTCGATGATGAATGTGAACTTCCTGAGAGCTTAGAACATATCCTTCCAGACAACCTCTTTGCCTCTCCTACTAAGAAGGGCTCTGAACGCCGATCATCATCGGTTTTCTCTTCTGCATTCGCGGAGCACAAAGATGGCGCTGCAATCACCAGCCCCTCGGTTGTTAATGGTGACTCGTCAATGCCTGCCTCATCACCTCTCCTGGCTACTCATAAATCTTGTTTCTTTGAGATGCCTAGGCTTTCCTCTGGGCAAAGAGCCCTAGGAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18874.p1 GENE.R_Transcript_18874~~R_Transcript_18874.p1 ORF type:complete len:700 (+),score=169.50,RRM_1|PF00076.18|2.2e-07 R_Transcript_18874:814-2913(+)
MESYEATRAVFSRVQSIDPENASKIMGYILLHHGEKDMIRFAYGPETLIVSIVNRAKTDLGLLSNTSSAPVVSPISNPISISRPNPLSLSLPSPRLPNNGFNPSSPSSPSVWSPHLSLSPNANASHSLSYAAVVNGTCSNTNGSFSSSSVGSPQVGFTGVSSSSRENFIEDYHLQDQNLSFLSDPLAIPAKNVDFFEQGMDLAMSPGCRSDSMLYPFCWDNSDGGAESNAHFHRRSSSFNDMYYGTDDSTSGFGFKPCLYYARGFCKNGTTCKFVHGAGFPDSPDNSSPKFDPFEQCQEEMLRSKFAQQQRVATQLMASGVNLPYNKLKFLRTEAQRSAAAALMMGEEFHKLNRVRMSRNEFSGMGLRGDSNPGSRQIYLTFPADSTFKEEDVSQYFSNFGPVQDVRIPYQQKRMFGFVTFVYPETVNMILAKGNPHFVCDSRVLVKPYKEKGKIPYKKQQQQQQLERGDFSCSSPSGLDSREPFDFQLGGRMFYSTQEMLLKKKLEEQADLQQALERQRRRLMNLQLMDLKNHLYHQQAVGSPVLSPNLSQLSSNLSAPNLSNGTSEDISEGSEESSTGAPDLQLGEGDKAAPVVEGNGNVQNKESHSVDDECELPESLEHILPDNLFASPTKKGSERRSSSVFSSAFAEHKDGAAITSPSVVNGDSSMPASSPLLATHKSCFFEMPRLSSGQRALGM*

Click here to download the sequence:
Link to NCBI Protein BLAST