Transcript Information: R_Transcript_189029.p1


Annotated TAIR IDAT4G30825.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15009605-15012319 | Forward length=904
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71814928346434
Replicate 20.36714842258008
Replicate 30.55076308974356
Condition 2: 8 Hour
Replicate 10.82957575231104
Replicate 20.65982930023171
Replicate 31.0315669423608
Condition 3: 24 Hour
Replicate 10.70253399166745
Replicate 20.55439448577407
Replicate 31.1960494364425


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189029.p1 GENE.R_Transcript_189029~~R_Transcript_189029.p1 ORF type:complete len:915 (+),score=174.69,PPR|PF01535.16|70,PPR|PF01535.16|0.026,PPR|PF01535.16|0.014,PPR|PF01535.16|0.26,PPR|PF01535.16|0.21,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.0005,PPR|PF01535.16|11,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|2.6,PPR|PF01535.16|19,PPR|PF01535.16|0.15,PPR|PF01535.16|0.17,PPR|PF01535.16|9.1e+03,PPR|PF01535.16|0.0003,PPR|PF01535.16|0.00047,PPR|PF01535.16|0.0037,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.0014,PPR|PF01535.16|8.2e-08,PPR|PF01535.16|6.5,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.0057,PPR_2|PF13041.2|4.4e-05,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|93,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|3e-12,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|6.3e+02,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|0.00037,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|2.2e-11,PPR_2|PF13041.2|4.7,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|46,PPR_3|PF13812.2|23,PPR_3|PF13812.2|8.4,PPR_3|PF13812.2|0.00077,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|8.7e+03,PPR_1|PF12854.3|8e+03,PPR_1|PF12854.3|21,PPR_1|PF12854.3|22,PPR_1|PF12854.3|5.9,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|6.8e-05,PPR_1|PF12854.3|0.0096,PPR_1|PF12854.3|69,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|6.3e-07,PPR_1|PF12854.3|7.8,TPR_7|PF13176.2|5.2e+02,TPR_7|PF13176.2|7.2e+02,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|2.8,TPR_7|PF13176.2|1.3e+03,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|2.1e+03,TPR_7|PF13176.2|1.6e+02 R_Transcript_189029:238-2982(+)
ATGGCCTCATTGCATTTGTCCTTTTGTTTGGATCCTTATGAACCCAAGCGGCTCAATTTCTGTGTAAGTTCTCATTTATCTGATGGTTTGCACTTTACCCAGTTCCTAAATTGCCCTAATGCAAGTGGGTCTTGTGTATTTTACTCTCTTTCTAAGGTTAACCATGTCAAAGCTACTTCCTTGAATGATGGTCATGTTGAATCATTGGATAATGGGTTACTTAGTGAGGGTTTGATTGCCCCCAAAAGGAATTCTTCCTCCCATCGAGCGGCAGGTGGTAAGAATGTAGGGAAGAGGGTTCATGTTGGGAGAAAAGTAGTGGTGGGGGGAAAGGAGAGATGTAAGCTTGATCCTATGGGGCTTTCCAATGAGCACGATAAAGATGGTGTTTGTCATGAAATAGATGTTGGTGTCTTTGGTATTGGGCCCGAGTCAAGTTTAGTGTCGTGCAATAAGGTGTTGAGAGGCTTGGAAAGGGGTAATGATGATGACAAAGTGATGAAATTGTTTGAGTGGATGAGGAGCCAGGGGAAGTTAGAAGGCAATTTGACGGCTTACAATCTCTTTTTGCGGGTGTTAGGAAGGAGAAGTGATTGGGATGCTGCGGAGAAATTGATTGAGGAAATGAAATTCAAATCAGGGTGTGAGCTCGAGTTTCAGGTCTTTAACACTATTATTTATGCTTGTTCTAAGAAGGGACTTGTGGATGTAAGTAGTAAATGGTTTCATATAATGCTGGATTATGGTGTTGAGCCTACTGTTGCGACTTTTGGTATGCTTATGAGTTTGTACCAAAAAGGTTGGAATGCTGAGGAGGCAGAGTTTGTGTTTTCCCAAATGAGGAACCTGAATGTTCGGTGTCAGTCTGCGTACTCAGCGATGATCACGATTTATACCCGATTGGGTTTGCATGCCAAGGCAGAAGAGGTTATTTCCCTGTTATTCAAGGATGAAGTTGCTTTGAATCTTGAGAACTGGCTGGTTATGCTAAATTCTTATAGCCGACAAGGAAAGATGGAAGAAGCTGAACAAATATTGGTTTCAATGTGTGAAGCAGGTTTTACACCTAGTATAGTTGCATACAACACACTGATTACTGGATATGGGAAGGTATCCAATATGAATGCTGCTGAAAGGGTATTAAAGAACCTAAAGAATGTAGGAGTTGAACCTGATGAAACAACATACAGGTCCATGATTGAAGGTTGGGCGAGATTTGGGAATTACGAGAAAGCAAAATGGTATTATGAGAAGCTCAAAGATCTTGGATTTAAACCAAATTCATCTAACTTATACTCATTGATAAACTTGCAAGCTAAACATGAGGACGAAGATGGTGCTAGTAGGACTCTTGATGATATGATGAAGATGGGTTGCCAACCATCCTCCATCCTTGGCTCCCTTATACAAGCATATGAGAAAGCTGGAAGGTTTGTTAGGGTACCTGTAATTCTGCAGGGTTCACTTTATGAACATGTGCTGACTAACCAGACTGCATGCTCAATTTTGGCTATGGCTTATGTGAAGCACTCCCTGGTGGATGATGCTATAAAGCTCCTAGAACTAAAGCGCTGGAAGGATTCAGCCTTCCAGGACAACTTGTACCATCTATTAATTTGTTCATGCAAGGAACTGGGCCATTTGGAGAATGCTGTCACAATTTTCACCCATATGCCCAAGTTGGATGGTAACCTGAACTTGCATGTTCTTTCCACAATGATTGACATTTTCAGTATGATGAACCGGTTTTCTGATGCAGACAGTATCTACCAACAGTTAAAGTCTTCAGGAGTTGTTTTGGACATGGTTGCTTACAGTATTGTTGTTCGGATGTATATGAAAGCTGGATTGTTGAATGATGCGTGCTGTGTTTTAGATAGTATGGACAACCAGACTAACATAGTCCCTGACATTTATCTCTTGCGTGACATGCTTAGATTATATCAAAAATGCAATAAACGAGACAAGTTGGCAGACTTGTATTATAAGATCTTGAAGAGTGGAGTAACTTGGGACCAGGAAATGTACAATTGTGTCATCAATTGTTGTGCTCATGCTTTGCCGGTTGATGAGCTCTCCAGGCTTTTTGATGAAATGATTCAGAGGGGGTTCACCCCTAACACTATCACCTATAATGTTATGCTTGATGTTTATGGGAAGTCCAGGCTTTTCAGGAAGGCTAGAAAAGTCTTTTGGATGGCCAGGAAACAGGGATTGGCCGATGTGATCTCTTACAATACTCTTATAGCAGCATATGGTCAAAACAAAGATTTCAGGAAGATGACGACCACTGTTAAACTGATGCAGTTCAATGGATTTGCTGTGTCCCTTGAAGCTTACAATTGTATGTTGGATGCTTATGGAAAAGAGCGTCAAATGGATGATTTCAGAAGTGTCTTGCAAAGACTGAAGGAGTCAAGTTGTACTTCTGATCATTATACCTACAATATTCTGATTAACATATATGGGGAGCAAGGTTGGATTGAAGAAGTGGCTACTGTGTTGACAGAGCTAAAAGAGTACGGACCAGGACCAGATTTGTGCAGCTATAATACATTGATAAAGGCATATGGGATTGCAGGAATGATTGAAGATGCTGTTTCTATGGTGAAACAAATGAGGGAAAATGGGATTGATCCTGATAGGATCACCTATCTCAATTTGATATCTGCCTTACGGAGGAATGACAAGTTTCTTGAGGCAGTCAGATGGTCGCTGTGGATGAAGCAGATGGGATTTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189029.p1 GENE.R_Transcript_189029~~R_Transcript_189029.p1 ORF type:complete len:915 (+),score=174.69,PPR|PF01535.16|70,PPR|PF01535.16|0.026,PPR|PF01535.16|0.014,PPR|PF01535.16|0.26,PPR|PF01535.16|0.21,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.0005,PPR|PF01535.16|11,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|2.6,PPR|PF01535.16|19,PPR|PF01535.16|0.15,PPR|PF01535.16|0.17,PPR|PF01535.16|9.1e+03,PPR|PF01535.16|0.0003,PPR|PF01535.16|0.00047,PPR|PF01535.16|0.0037,PPR|PF01535.16|0.0023,PPR|PF01535.16|0.0014,PPR|PF01535.16|8.2e-08,PPR|PF01535.16|6.5,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|0.0057,PPR_2|PF13041.2|4.4e-05,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|93,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|3e-12,PPR_2|PF13041.2|0.7,PPR_2|PF13041.2|0.54,PPR_2|PF13041.2|6.3e+02,PPR_2|PF13041.2|2.4e+02,PPR_2|PF13041.2|0.00037,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|1.7e-10,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|2.2e-11,PPR_2|PF13041.2|4.7,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|2.9e+02,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|21,PPR_3|PF13812.2|1.2e+03,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|46,PPR_3|PF13812.2|23,PPR_3|PF13812.2|8.4,PPR_3|PF13812.2|0.00077,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|0.41,PPR_3|PF13812.2|0.46,PPR_3|PF13812.2|0.28,PPR_3|PF13812.2|0.001,PPR_3|PF13812.2|8.7e+03,PPR_1|PF12854.3|8e+03,PPR_1|PF12854.3|21,PPR_1|PF12854.3|22,PPR_1|PF12854.3|5.9,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|3.3,PPR_1|PF12854.3|6.8e-05,PPR_1|PF12854.3|0.0096,PPR_1|PF12854.3|69,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|0.0003,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.062,PPR_1|PF12854.3|6.3e-07,PPR_1|PF12854.3|7.8,TPR_7|PF13176.2|5.2e+02,TPR_7|PF13176.2|7.2e+02,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|2.8,TPR_7|PF13176.2|1.3e+03,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|2.1e+03,TPR_7|PF13176.2|1.6e+02 R_Transcript_189029:238-2982(+)
MASLHLSFCLDPYEPKRLNFCVSSHLSDGLHFTQFLNCPNASGSCVFYSLSKVNHVKATSLNDGHVESLDNGLLSEGLIAPKRNSSSHRAAGGKNVGKRVHVGRKVVVGGKERCKLDPMGLSNEHDKDGVCHEIDVGVFGIGPESSLVSCNKVLRGLERGNDDDKVMKLFEWMRSQGKLEGNLTAYNLFLRVLGRRSDWDAAEKLIEEMKFKSGCELEFQVFNTIIYACSKKGLVDVSSKWFHIMLDYGVEPTVATFGMLMSLYQKGWNAEEAEFVFSQMRNLNVRCQSAYSAMITIYTRLGLHAKAEEVISLLFKDEVALNLENWLVMLNSYSRQGKMEEAEQILVSMCEAGFTPSIVAYNTLITGYGKVSNMNAAERVLKNLKNVGVEPDETTYRSMIEGWARFGNYEKAKWYYEKLKDLGFKPNSSNLYSLINLQAKHEDEDGASRTLDDMMKMGCQPSSILGSLIQAYEKAGRFVRVPVILQGSLYEHVLTNQTACSILAMAYVKHSLVDDAIKLLELKRWKDSAFQDNLYHLLICSCKELGHLENAVTIFTHMPKLDGNLNLHVLSTMIDIFSMMNRFSDADSIYQQLKSSGVVLDMVAYSIVVRMYMKAGLLNDACCVLDSMDNQTNIVPDIYLLRDMLRLYQKCNKRDKLADLYYKILKSGVTWDQEMYNCVINCCAHALPVDELSRLFDEMIQRGFTPNTITYNVMLDVYGKSRLFRKARKVFWMARKQGLADVISYNTLIAAYGQNKDFRKMTTTVKLMQFNGFAVSLEAYNCMLDAYGKERQMDDFRSVLQRLKESSCTSDHYTYNILINIYGEQGWIEEVATVLTELKEYGPGPDLCSYNTLIKAYGIAGMIEDAVSMVKQMRENGIDPDRITYLNLISALRRNDKFLEAVRWSLWMKQMGFD*

Click here to download the sequence:
Link to NCBI Protein BLAST