Transcript Information: R_Transcript_189063.p1


Annotated TAIR IDAT1G26390.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9130164-9131756 | Reverse length=530
E-Value7E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.474128996446
Replicate 210.086073284091
Replicate 311.474776964054
Condition 2: 8 Hour
Replicate 112.220048487691
Replicate 215.798903431716
Replicate 320.798013664107
Condition 3: 24 Hour
Replicate 110.642123724244
Replicate 28.4510805094735
Replicate 37.8141151312101


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189063.p1 GENE.R_Transcript_189063~~R_Transcript_189063.p1 ORF type:complete len:535 (+),score=55.54,FAD_binding_4|PF01565.19|2.5e-22,BBE|PF08031.8|8.1e-17 R_Transcript_189063:35-1639(+)
ATGAAGTTCTTCAACCCTTATTTGCTAGCCATTTCCCTTGCACTATTTCAACTTATATTCTTATCATTTGCTTCCCACGTTGGAGCAGCAAATTCACCCATTAACAACTTTCTTCAATGCCTTCCTTCCCGTTCAAATCCTTCAAATCCAATCTCTAATTCCACCTACACTCCTACAAACCCTTCATTCTTAACTGTTCTTCGAGCCTACATACGTGACAGTAGATTCAACACGTCTTCAACTCCAAAACCTCTAGCCATAATCACAGCCTTAGATGTGTCCCATGTACAAGCCACCGTGCTATGTGCAAAATCAAGTGGGTTACAAATCAGGATACGAAGTGGGGGCCACGATTTCGAGGGCATGTCTTACGTGTCAAATGTCCCCTTTGTGATCCTAGATATGTTCAATCTTCGATCAATTAGTGTTGATATACCAAGTGAAAGTGCTTGGATTCAGGCTGGGGCTACTATTGGTGAACTTTATTATAGCATAGCTAAGAAAAGTAACATCCATGCTTTTCCTGCGGGTGTATGTTTCACTCTTGGTGCCGGTGGTCATTTTAGTGGGGGTGGGTATGGTAACATGCTAAGACAATTCGGCTTGTCCATCGATAATATTATCGATGCACAATTCGTAGATGTTAATGGTAGGGTTCTTAATCGAACGACAATGGGTGAAGATCTATTTTGGGCTATTAGGGGTGGTGGAGGAGCTAGTTTTGGGGTGGTTTTAGCATGGAAAATCAAGTTAGTACGAGTACCAAAAGTTGTCACGGTTTTCAATGTCCCTAGGACCTTAGAACAAGGTGCAACCAACGTTGTACTCCAATGGCAACAAGTCGCCACTAAGATTGATCGGAAGCTCTTCATAAGAGTACAACCACAAGTACAATTCCTACATAACGGCAAAAAGACTGTACAAGTCTCATTCATAGGGATGTACCTAGGACGAGCTAGCTCCTTACTTTCATTAATGGAGACAAACTTTCCATTATTAGGGTTACAAGGGCAAGATTGTAAGGAGATGTCATGGGTAGAATCAAACCTATTTTGGAATGGCGACGATCCAAAAAGAACCCCTATTGAGGTGTTATTACAAAGAACACCAACTTCATCTCATGCATATTCAAAACACAAATCTGATTATGTAAAAACACCAATCCCAAGGGCTGGCTTGGAGACAATATGGCAAAAAATGATTGAGTTAGAAAGTGTGCTCATGCAATTGAACCCATATGGAGGGAGGATGAGTGAGATCCCTGAGAATGCAACGGCGTTCCCACATCGGTCAGGGAACTTATTCAAGATGCAATATATAACCATTTGGCAAGATGATGGAACTCAAGCTTTGGAGAAGAACATCAAGGCAACTCGAGATCTTTATGCTACATTCACTCCATATGTGTCTAGGAATCCAAGAGAAGCGTTCTTAAATTATAGGGATATTGACATTGGGACCAATAGTAATGGGAGCTTGGGTTTTGCTATGGATTACTTCAAGGGGAATGTTAAGAGGCTTCTTCAAGTCAAGGCTGAGGTTGATCCCACCAATTTCTTCCGCTATGAACAAAGTATTCCGGTTCTTCCAGCTGTGCAACAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189063.p1 GENE.R_Transcript_189063~~R_Transcript_189063.p1 ORF type:complete len:535 (+),score=55.54,FAD_binding_4|PF01565.19|2.5e-22,BBE|PF08031.8|8.1e-17 R_Transcript_189063:35-1639(+)
MKFFNPYLLAISLALFQLIFLSFASHVGAANSPINNFLQCLPSRSNPSNPISNSTYTPTNPSFLTVLRAYIRDSRFNTSSTPKPLAIITALDVSHVQATVLCAKSSGLQIRIRSGGHDFEGMSYVSNVPFVILDMFNLRSISVDIPSESAWIQAGATIGELYYSIAKKSNIHAFPAGVCFTLGAGGHFSGGGYGNMLRQFGLSIDNIIDAQFVDVNGRVLNRTTMGEDLFWAIRGGGGASFGVVLAWKIKLVRVPKVVTVFNVPRTLEQGATNVVLQWQQVATKIDRKLFIRVQPQVQFLHNGKKTVQVSFIGMYLGRASSLLSLMETNFPLLGLQGQDCKEMSWVESNLFWNGDDPKRTPIEVLLQRTPTSSHAYSKHKSDYVKTPIPRAGLETIWQKMIELESVLMQLNPYGGRMSEIPENATAFPHRSGNLFKMQYITIWQDDGTQALEKNIKATRDLYATFTPYVSRNPREAFLNYRDIDIGTNSNGSLGFAMDYFKGNVKRLLQVKAEVDPTNFFRYEQSIPVLPAVQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST