Transcript Information: R_Transcript_189066.p1


Annotated TAIR IDAT4G20800.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11139656-11141242 | Forward length=528
E-Value7E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.43089582261
Replicate 218.643266748954
Replicate 318.167412576259
Condition 2: 8 Hour
Replicate 18.4434017059466
Replicate 24.4336231236833
Replicate 33.2860674398976
Condition 3: 24 Hour
Replicate 112.666376401492
Replicate 216.541444167933
Replicate 310.377791015339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189066.p1 GENE.R_Transcript_189066~~R_Transcript_189066.p1 ORF type:5prime_partial len:116 (-),score=24.54,BBE|PF08031.8|2.2e-18 R_Transcript_189066:119-466(-)
TGTGAGATCCCTGAAAATGCAACAGCATTCCCACATCGGTCAGGGAACGTATTCAAGATGCAATATATAACCATTTGGCAAGATGATGGAACCCAAGCTTTGGACAAGAACATCAAGGCAACTCGAGATCTTTATGCTACATTCACTCCATTTGTGTCTAGGAACCCAAGAGAAGCGTTCTTGAATTATAGGGATATTGACATTGGGACCAATAGTAATGGGAGCTTGGGTTTTGCTATGGATTACTTCAAGGGGAATGTTAAGAGGCTTCTTCAAGTCAAGGCTAAGGTTGATCCCACCAATTTCTTCCGCTATGAACAAAGTATTCCGATTGCTCCAGCTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189066.p1 GENE.R_Transcript_189066~~R_Transcript_189066.p1 ORF type:5prime_partial len:116 (-),score=24.54,BBE|PF08031.8|2.2e-18 R_Transcript_189066:119-466(-)
CEIPENATAFPHRSGNVFKMQYITIWQDDGTQALDKNIKATRDLYATFTPFVSRNPREAFLNYRDIDIGTNSNGSLGFAMDYFKGNVKRLLQVKAKVDPTNFFRYEQSIPIAPAV*

Click here to download the sequence:
Link to NCBI Protein BLAST