Transcript Information: R_Transcript_18913.p1


Annotated TAIR IDAT5G30490.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:11612199-11614271 | Forward length=236
E-Value2.3E-67
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6418242950949
Replicate 24.8864117332475
Replicate 34.4980502916081
Condition 2: 8 Hour
Replicate 15.0752520072472
Replicate 25.6918608323018
Replicate 36.2705563961337
Condition 3: 24 Hour
Replicate 14.8420102516612
Replicate 25.2130611923183
Replicate 34.6163158976002


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18913.p1 GENE.R_Transcript_18913~~R_Transcript_18913.p1 ORF type:5prime_partial len:275 (+),score=87.75,BCNT|PF07572.8|7.6e-25 R_Transcript_18913:2-826(+)
GGGGTGGTATACGCAGGGAGCTTCGAAGTGGTGGCAACTTGCTCTCATCTATTTAAGGTGACGCTGGAAATGGATGGGCTTCAGACGGAGTCCAAAAATGAACCAGCTACAGTCCCTTCTTCGCAAGCTAAGCCTGAAGAATCTGAAATCAAAGCTCGGGTAGATGCTGTGTGGGAGCAGCTGAATAAAGGAGTATCTACAAAGACACTGAACTCGATTGTAAACAGTTGTAGCTCAAATGGGAAAAGAAGTGTGCAGAAGGATGACACTTCTCATAATTGGATGACAGTCTTGGGCTTGGGATCAAAGAAAACAGTAGCAAATGGGACTCCTGTAGAACGGAAAAACACTACTTCTGAAAATGGAACCAGTGATGAGGCCAAGAAGCTTGCAGCTGCTGCTATTGCTGCAGCCAAAGATGCCGCTGCTGCTTCAGCATCTGCTGCTTTAGCCAGGGGAAAGATTCAGGTCTCTGAGATTCGAGACTTTGCAGGTGAAGAGATAGAAGTGAAGAAGCTAGTTGACGCTGATGAAAAGGCCAAGTCCCCGGCAGGGCCATCATCTGCAGTTGATGCTGTGCTTGATCAGATTAGGAAGAAACCGAAGCTTAGTCTTCTTGACAAGACTAAGAAGGACTGGGGAGAATTTAAAGGAGAAAACAAGGGCTTGGAGGAGGAATTGGATGCCTACAAAAAGAGTTCAAATCAGTATCTAGACAAAGTCTCCTTCCTACAAAGGGCAGATTACAGAGAATTTGAGCGAGAGAGAGATGCAAGACTTGCAATACAGGCAAAGAGGAGGCCGGATATGCGTGAGGATCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18913.p1 GENE.R_Transcript_18913~~R_Transcript_18913.p1 ORF type:5prime_partial len:275 (+),score=87.75,BCNT|PF07572.8|7.6e-25 R_Transcript_18913:2-826(+)
GVVYAGSFEVVATCSHLFKVTLEMDGLQTESKNEPATVPSSQAKPEESEIKARVDAVWEQLNKGVSTKTLNSIVNSCSSNGKRSVQKDDTSHNWMTVLGLGSKKTVANGTPVERKNTTSENGTSDEAKKLAAAAIAAAKDAAAASASAALARGKIQVSEIRDFAGEEIEVKKLVDADEKAKSPAGPSSAVDAVLDQIRKKPKLSLLDKTKKDWGEFKGENKGLEEELDAYKKSSNQYLDKVSFLQRADYREFERERDARLAIQAKRRPDMREDP*

Click here to download the sequence:
Link to NCBI Protein BLAST