Transcript Information: R_Transcript_189193.p1


Annotated TAIR IDAT3G19780.1
Annotated Gene NameLOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32 species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6870238-6874677 | Forward length=1059
E-Value1.7E-226
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9211491629661
Replicate 20.8934595921829
Replicate 34.3228255963137
Condition 2: 8 Hour
Replicate 11.3817185585402
Replicate 21.7582562039785
Replicate 32.3676013852679
Condition 3: 24 Hour
Replicate 12.6759331273735
Replicate 21.5914062844265
Replicate 33.5838332373551


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189193.p1 GENE.R_Transcript_189193~~R_Transcript_189193.p1 ORF type:complete len:1081 (+),score=213.14,DUF179|PF02622.11|1.3e-12,Thioredoxin|PF00085.16|5.7,Thioredoxin|PF00085.16|0.0097,Thioredoxin|PF00085.16|8.9 R_Transcript_189193:45-3287(+)
ATGGTAGTTTTAAATTTGTTCGCTCCGTTCGCTGCAGTGGTGATTATCCTGCATCTTACCATTCATGCTAGTATCGCTACAGTTGACTCCGAATTGAATGTCGATAATCAGTTCGAATGGCAAATACTTTCTGCAAAAAATTTCTCCCATCAGATCCGTCTTCACCCTCACATTCTCCTGATCGTCACTGAACCCTGGTGTGGGGAATCTCGATCTCTGATGAGGGACATATCTCAGGGATTGGCTAAAAAGGCACAGCAGTATGACTCCTTGAAGCTAATGATCATACATCGTAATCGTGATAGGGTACTGGCAGATTCACTTGATGCTTCAGAGGGAATTACAGTTCTGTGTTACTGGCATGCTGTGCCTTATAATTATCTGGGAAGTCTTAGAGCTAAAGATATATTATCCTCCATCCATTATTTAATATCTCTTGCACCTGAAGACCTTCCTTTTGTACGACTTGGTGATGCCAAGGACTTGAAAACATTTCTCGCATCAACTGATAAAGCTGTTCTTCTCCTAGAATCTTGTGGATGGACCTCAATACTGATGGCACAGCAGACTGGGAATATCACCGTGCAAGGTGGTTTGAATAAAGAAACTAATAGAACATTGGCATCTCGAAGGCAGAAAACCTTGAAGGGCATGGCAAACGAAGTGAACTGTGAGGTTGAAGATGGTTGTGTTGGAAGTCCATGGGTTGGAGAATTTAGCGCCGAAAATGCTACAGCTTTTTCAACAAATGAGGATGAGCAGCCTACATTTGGAATGTCCTGCAGCTTTGAAGAATATAAGAGATTTGAGTCTTTCTTTCCCAAGTTCGTGGCCGCCGCAAGGGCTATCTATCTTCCCCCTCAAAGGCAAAGATATGGTATTCTTTCTGAGAGGTTGTCGCTTTCACCTCTTGGTGTTGATGTGTCTGATGGATGGGCATTGATAATTTCCTATGCGGGATGTCCTGGATGCTTGAAGATTCTCAAGGCAGAGGATCATCTCCAGGAGGCTCTGGAGATTGATGATGTACCTGTATTGGAGTTGGAAGATGAAAGAAACGATCATGGACCTGCTTTACCTGTGGATAAACCATCGATACTACTCTTTGTGGATAGGATGTCGGACTCCTCTGACACTAGAAGAACAAGTCAGGAAGCACTTCATGCATTTAAAGAAGTAGCAATGCAGCATTGGAAGCCATGTCAGGCTGATGGGCAAAATAGTGGTTGTTCAAAAAGATCCTCACTCCACAAGTATCAAAAGCCAGCTATTATGGTGGGGAATGATAGATCATTGTTCTCATCTTTGCCTCACAAGAAGGATAAGATGTCTATCATGATCTTAAATGATGGAAAATATGTTACTTTCAATAATGAGGTCTTAAATTTACAAACTGGTTCCTTACACGAGGTTTTGACATATTTGCTAAAGAAGAAGAAGCCATCGAAGTTGAGCTCTCTTGTAAAGGAGGCAGGCTTCCAACTTCTTTCGAATGATGTAGACATAAAAATAGAAGATATGATGTCATCTCAGGATGAAAGCCAAGAGCAGGAATCAGAAGCAAGGTCAGTTCAAGACTCTGACAAAGATGTGGCTGACATGAATCAGGATGAAAGTGGTAAAATTTTAGCCATGGCAGAACGGGAGGAACACACTCAAGTTGTTAATAGTGAAGGTGCATATAATGGTGAAAAAAAGAGAGCTTCAAAAGACCTTGCAAGTAAAGAATCTGCTTTTGTGGGTTCTCATCAATCTCCCAATGTTCATGAAGTTGCTTCTACTGTAGACTTAGATTCTAAGGTACAAGCTTATGTACTAGCAGACAAGTCAGAAGGACTGAGCCATCCCTTTAGCAGTTTCACTGGTTCATTTTTCTTTTCAGATGGGAACTATGGGTTCCTTAAACGTGTCACTAATGACTGGGAAATCCCAACAATTGTGCTAATTGATCCGATCTCCCAGCAGCATTATGTCTTCGCGAAAGGAGCAAATTTCACTGTTTCTTCTATGTCTAGTTTTCTTGATGGGTTTCTTAATGGAATGCTTGTTCCTTATCAACGCTCTGGACCGCTGCACAACTCTGTTGAAAGGACACGTCCCCCATTTGTTAATTTGGATTTTCATGAACAAGATTCTATCCCTAGTGTTACAACCAAGACCTTTTCTGAATTAGTTCTTGGTTCTGACCAATCTGATGCTCAAAATGCAACCAATGCTTGGCATGAGGACGTACTGTTGCTTCTGAGTAGTAGCTGGTGTGGATTTTGTCAGAGAATGGAGTTAGTTGTTCGTGAAGTATATCGGGCCATAAAGGGCTACATGAACACAACCAAGTATGAGGCAACAAGCAAGGAGTGGTTATCTCATGATGACTTGAAGGATCTTATAACAAAGCTGCCGGTAGTCTATTCAATTGATTGTACTTTGAATGAGTGTGGCTGGATCCTTAATTCAGTGGGCCAAACTGAAGTTTATCCAACCCTACTCCTCTTTCCAGCAAAGAAGAAGACAGCTATCCCTTACAATGGAAACGTGATGGTCACAGACATTATCAAATTTATAGCAAACCATGGAAGTATTTCAAATCATCTTGCCAAGCAGAAGGGAGACATTTGGATTGATGGGGAAGAGATGGCTAATCAAGACAACAGGAAATATGAATTTATGAATGGAGGTAGCAAGGAATCTACTGATGAGCAGAATGTGGAGTCCCTTGTGAAAAATGGGAAGTTTAAAAATGAAGTCATATTGGAGCTGAATGAACCTGCCGGTCCACAAGGCTTGCCTGTTGGCTCCTTTCTTAGTGCCATGAATGATATTAGTCCATTCAGTAAAGCTAGAGTTCTTATAGTGAGTGCTGATCAAAATATGGGGTTTCAGGGGCTCATACTTAACAAGCCTATTAGCTGGGACTTCGTACTGGAATTTGAAAATGTTGAACTGCTAAAAGACGTTCCACTTTTTTGGGGGGGGCCAGTCGTACATGAAGGAATGCCTCTTGTTTGCTTAACCAAGAGCTCTATGAATGGTCAGTATCCACAAGTTCTTCCTGGTGTGTATTTTATTGATCAATTGGCAACAGTTAATGAAATAGAGCTAGTTAAGGCAGGAATTCGATCTGCGATGGATTATTGGTTCTTTTGGGGTTACTCTGGCTGGACATGGGACCAACTTTTTAATGAGATGGCTACTGGAGTGTGGAGCCTCCAAGATGGGAACATGGTAGACTTACAGTGGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189193.p1 GENE.R_Transcript_189193~~R_Transcript_189193.p1 ORF type:complete len:1081 (+),score=213.14,DUF179|PF02622.11|1.3e-12,Thioredoxin|PF00085.16|5.7,Thioredoxin|PF00085.16|0.0097,Thioredoxin|PF00085.16|8.9 R_Transcript_189193:45-3287(+)
MVVLNLFAPFAAVVIILHLTIHASIATVDSELNVDNQFEWQILSAKNFSHQIRLHPHILLIVTEPWCGESRSLMRDISQGLAKKAQQYDSLKLMIIHRNRDRVLADSLDASEGITVLCYWHAVPYNYLGSLRAKDILSSIHYLISLAPEDLPFVRLGDAKDLKTFLASTDKAVLLLESCGWTSILMAQQTGNITVQGGLNKETNRTLASRRQKTLKGMANEVNCEVEDGCVGSPWVGEFSAENATAFSTNEDEQPTFGMSCSFEEYKRFESFFPKFVAAARAIYLPPQRQRYGILSERLSLSPLGVDVSDGWALIISYAGCPGCLKILKAEDHLQEALEIDDVPVLELEDERNDHGPALPVDKPSILLFVDRMSDSSDTRRTSQEALHAFKEVAMQHWKPCQADGQNSGCSKRSSLHKYQKPAIMVGNDRSLFSSLPHKKDKMSIMILNDGKYVTFNNEVLNLQTGSLHEVLTYLLKKKKPSKLSSLVKEAGFQLLSNDVDIKIEDMMSSQDESQEQESEARSVQDSDKDVADMNQDESGKILAMAEREEHTQVVNSEGAYNGEKKRASKDLASKESAFVGSHQSPNVHEVASTVDLDSKVQAYVLADKSEGLSHPFSSFTGSFFFSDGNYGFLKRVTNDWEIPTIVLIDPISQQHYVFAKGANFTVSSMSSFLDGFLNGMLVPYQRSGPLHNSVERTRPPFVNLDFHEQDSIPSVTTKTFSELVLGSDQSDAQNATNAWHEDVLLLLSSSWCGFCQRMELVVREVYRAIKGYMNTTKYEATSKEWLSHDDLKDLITKLPVVYSIDCTLNECGWILNSVGQTEVYPTLLLFPAKKKTAIPYNGNVMVTDIIKFIANHGSISNHLAKQKGDIWIDGEEMANQDNRKYEFMNGGSKESTDEQNVESLVKNGKFKNEVILELNEPAGPQGLPVGSFLSAMNDISPFSKARVLIVSADQNMGFQGLILNKPISWDFVLEFENVELLKDVPLFWGGPVVHEGMPLVCLTKSSMNGQYPQVLPGVYFIDQLATVNEIELVKAGIRSAMDYWFFWGYSGWTWDQLFNEMATGVWSLQDGNMVDLQWP*

Click here to download the sequence:
Link to NCBI Protein BLAST