Transcript Information: R_Transcript_189263.p1


Annotated TAIR IDAT4G14050.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8103645-8105483 | Reverse length=612
E-Value1.4E-276
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0157130482168
Replicate 20.7560042703086
Replicate 31.1247170669142
Condition 2: 8 Hour
Replicate 10.84157637298224
Replicate 20.47576344342948
Replicate 30.65357681448202
Condition 3: 24 Hour
Replicate 11.6156885610332
Replicate 21.2994915221944
Replicate 31.8627833776083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189263.p1 GENE.R_Transcript_189263~~R_Transcript_189263.p1 ORF type:complete len:611 (+),score=113.60,PPR|PF01535.16|0.0014,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|5.8,PPR|PF01535.16|0.00044,PPR|PF01535.16|0.00023,PPR|PF01535.16|0.27,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.18,PPR|PF01535.16|0.007,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|7.5e+03,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.56,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|9.2,PPR_2|PF13041.2|3.3e-11,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|0.97,PPR_2|PF13041.2|24,PPR_2|PF13041.2|7.1e+03,PPR_2|PF13041.2|1.1e+04,PPR_2|PF13041.2|1.8e+02,DYW_deaminase|PF14432.2|1.1e-33,PPR_1|PF12854.3|0.081,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|2.8e+03,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|31,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|61,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|30,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|7.8e+03 R_Transcript_189263:188-2020(+)
ATGCTTTACTCTCATTATATCCACCAACTAGGAGCTTGTGCCAAAACCCATTCAATCTTTCTTGGCCAAAAACTCCATGCCCAGATCATTAAACATGGCCTTCATCAATATGGGCCTCTACCAAATTCCCTTCTTGAAATGTATGGAAAATGTGGGGTTATTAAGAATGCACTCCAACTGTTTGATGAAATGCCCAAGAGAGATTTTGTCTCTTGGGCTTCGATTCTTACTGCCCACAACCTTGCTGATCTTCCTCACAGAACATTGTGTATGTTTCCCAGAATGTGGGAGGTAAATAGGTTAAGGGCTGACCACTTTGTCATTGCTAGCCTTGTTAAAGCTTGTGCTAGTTTGGGTGATGTTAGGTTAGGTAAACAAGTGCATGGTCATTTTGTTAGGTCACCCTGTCTTGATGATGATGTTGTTAAGTCATCACTTGTTGGTTTGTATTCCAAATGTGGGTTTCCTGGTTATGCCAGGATGGTTTTTGATTCGATTCGGGTGAGGAATACTATTTCTTGGACAGCTTTGGTTTCTGGTTATGCTAAAAGTGGGTGGAGAATGGATTCTTTGGAGCTTTTCTCGAGAATGCCTGTCAAGAATTTGTTGTCTTGGAGTGCTCTGATATCTGGGTTTGTGCAAAGTGGTCATGCAGTTGATGCATTTCATGTTTTTATGAAAATGAGAAGAGAGGCTGATCATGAGGCTGACCCATTTATACTTTCGAGCATTATTGCATCATCTGCTAATATGGCGATGCTACAGCTGGGGAAGCAAGTTCATTGCTTGGTTATAGTCCTTGGTTTTGAGCGTAACTTATTCATTCGCAATGCGCTAGTTGATATGTATGCCAAATGCAGTGAACTGTTGGCTGCCAGAAGTATTTTTCGTGGCATGCTACAACGAGATGTAGTGTCGTGGACTTCAATTATAGTTGGCACGGCCCAACATGGCCAAGCAAAGGAAGCATTGTCACTGTATGATGAGATGGTGTTGGAAGGTGTCAAACCAAATGAAGTGACGTTTCTTGGTTTGATTTATGCTTGTAGCCATGTGGGTTTAGTTAGCAAAGGTCGTCATTTGTTTCGTTCGATGGTTGAGGATTATGGAATTTGGCCATCTCTACAGCATTATACATGCCTATTGGATCTTCTAAGCAGATCTGGTCACCTTGTCGAGGCTGAGGAAGTCCTGAAGACGATGCCATCTGAACCTGATGAAGTTGCTTGGGCTGCTTTGCTAAGTGCTTGCAGGCAACACAAGAATACAGAAGTGGCAATTCGGGTTGCTGATCATTTACTGCACCTGGGACCGAAAGATCCTGCCACTTTTATTTTGCTTTCCAATACATATGCTTCTGCTTCCATGTGGGAAGGTGTATCTAAAGTGCGGAAGCTGATGTCCGAAATGGACTTTAAGAAAGAGCCTGGCTATAGCTGTATCGAACTTACAAAGGAGAGTCAGGTTTTCTATGCAGGGGAGATATTTCATCCTATGAAGGACCAGCTTCTTGTTTTGCTCAAGAAATTGGATGAAGAGATGAGGAAAAAAGGTTATGTTCCAGATACTAGCTATGTTTTACATGAATTGGAGCAAGATGAGAAGGAGAGGCACTTGTTGTGGCACAGCGAACGGTGGGCTGTGGCTTATGGGCTGCTTAAATCAGTTCCTGAAACCGCCATACGCATAGTGAAGAATTTACGTATTTGTGGGGATTGTCATACATTTCTAAAATTCATTAGTAGCATTACTAGGAGAGAGATCATTGTTCGAGATATCAGCAGGTTTCATCATTTCAATGATGGCAAATGTTCTTGTGGAGATTTTTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189263.p1 GENE.R_Transcript_189263~~R_Transcript_189263.p1 ORF type:complete len:611 (+),score=113.60,PPR|PF01535.16|0.0014,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|5.8,PPR|PF01535.16|0.00044,PPR|PF01535.16|0.00023,PPR|PF01535.16|0.27,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.18,PPR|PF01535.16|0.007,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|4.7e+02,PPR|PF01535.16|7.5e+03,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|0.56,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|9.2,PPR_2|PF13041.2|3.3e-11,PPR_2|PF13041.2|0.46,PPR_2|PF13041.2|0.97,PPR_2|PF13041.2|24,PPR_2|PF13041.2|7.1e+03,PPR_2|PF13041.2|1.1e+04,PPR_2|PF13041.2|1.8e+02,DYW_deaminase|PF14432.2|1.1e-33,PPR_1|PF12854.3|0.081,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|0.68,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.0014,PPR_1|PF12854.3|0.49,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|2.8e+03,PPR_3|PF13812.2|7.4e+02,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|31,PPR_3|PF13812.2|6.5,PPR_3|PF13812.2|61,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|18,PPR_3|PF13812.2|0.03,PPR_3|PF13812.2|30,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|7.8e+03 R_Transcript_189263:188-2020(+)
MLYSHYIHQLGACAKTHSIFLGQKLHAQIIKHGLHQYGPLPNSLLEMYGKCGVIKNALQLFDEMPKRDFVSWASILTAHNLADLPHRTLCMFPRMWEVNRLRADHFVIASLVKACASLGDVRLGKQVHGHFVRSPCLDDDVVKSSLVGLYSKCGFPGYARMVFDSIRVRNTISWTALVSGYAKSGWRMDSLELFSRMPVKNLLSWSALISGFVQSGHAVDAFHVFMKMRREADHEADPFILSSIIASSANMAMLQLGKQVHCLVIVLGFERNLFIRNALVDMYAKCSELLAARSIFRGMLQRDVVSWTSIIVGTAQHGQAKEALSLYDEMVLEGVKPNEVTFLGLIYACSHVGLVSKGRHLFRSMVEDYGIWPSLQHYTCLLDLLSRSGHLVEAEEVLKTMPSEPDEVAWAALLSACRQHKNTEVAIRVADHLLHLGPKDPATFILLSNTYASASMWEGVSKVRKLMSEMDFKKEPGYSCIELTKESQVFYAGEIFHPMKDQLLVLLKKLDEEMRKKGYVPDTSYVLHELEQDEKERHLLWHSERWAVAYGLLKSVPETAIRIVKNLRICGDCHTFLKFISSITRREIIVRDISRFHHFNDGKCSCGDFW*

Click here to download the sequence:
Link to NCBI Protein BLAST