Transcript Information: R_Transcript_189318.p2


Annotated TAIR IDAT5G49800.1
Annotated Gene NamePolyketide cyclase/dehydrase and lipid transport superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20234771-20236135 | Reverse length=242
E-Value1.7E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.347591234074
Replicate 29.351293462721
Replicate 311.838355984566
Condition 2: 8 Hour
Replicate 18.2305428394102
Replicate 29.0195153645118
Replicate 37.3216580653662
Condition 3: 24 Hour
Replicate 18.8744464913814
Replicate 29.7302612752547
Replicate 38.1848979711507


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189318.p2 GENE.R_Transcript_189318~~R_Transcript_189318.p2 ORF type:complete len:238 (+),score=39.68,START|PF01852.15|5.2e-11 R_Transcript_189318:3160-3873(+)
ATGAGTAGTCCTGCACCATGCAGTCGATCCTGGTCTATAAGTGAAGATTCACTGAAAAGATATGTGCATTATGCAAGTGAGAGCTGCATACAAGAACTGCTCTCAGCTTCGGATTCAAGCAGGAATGGAAATGGGAGTGATGGGTGGAAGGTTCTGTCGTTCGAAGACGGGATTGAGATTTCGAAGAGACGATCAGGATCGTTACATATCTTTCGTAGCAGGTGGCTGCTCAAATCAGTCTCTCCTCAGCAGTTCTTTGCTGTGGCTAATGCCATTGATGCTGCTAAGCAATGGGACTCTGATTTAGTGGAGGCAAGATACATAAAGGATCTAGAGGATAATTTGAGCATAATACGTCTAAGGTTTGGAGAAGCCTCCAAACCCCTGTTCAAGAACAGAGAATTCATTGTTTATGAACGGCGAGAAATGATGGATGATAGCACCCTGGTGGTTGCAGTAGCTTCACTTCCAAAACAGATAGCAGCTGGATTATATCCTAAGCAAAACAATGCAATTAGAGGGTTACTGTTGCAATCTGGATGGGTTGTAGAGAAGCTCGAGGGTGATTCCTGTATGGTAACTTATGTTGTTCAGCTAGATCCAGCAGGATGGCTTCCAAAGTTCTTTGTCAATCGGCTAAACACAAAACTTGTAATGATTATTGAAAATCTAAAACAACTAGCACAAAGTACTCCAATTGATGGAGCAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189318.p2 GENE.R_Transcript_189318~~R_Transcript_189318.p2 ORF type:complete len:238 (+),score=39.68,START|PF01852.15|5.2e-11 R_Transcript_189318:3160-3873(+)
MSSPAPCSRSWSISEDSLKRYVHYASESCIQELLSASDSSRNGNGSDGWKVLSFEDGIEISKRRSGSLHIFRSRWLLKSVSPQQFFAVANAIDAAKQWDSDLVEARYIKDLEDNLSIIRLRFGEASKPLFKNREFIVYERREMMDDSTLVVAVASLPKQIAAGLYPKQNNAIRGLLLQSGWVVEKLEGDSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKQLAQSTPIDGAI*

Click here to download the sequence:
Link to NCBI Protein BLAST