Transcript Information: R_Transcript_189516.p1


Annotated TAIR IDAT2G30950.1
Annotated Gene NameFtsH extracellular protease family
Annotated Gene Symbol(s)VAR2, FTSH2
Annotation TypeOrtholog
Chromosome Positionchr2:13174692-13177064 | Forward length=695
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.845347821223
Replicate 224.953876465989
Replicate 328.27910914748
Condition 2: 8 Hour
Replicate 129.559195238473
Replicate 239.026977947278
Replicate 341.03047522968
Condition 3: 24 Hour
Replicate 131.480273795686
Replicate 222.62647422875
Replicate 333.382686285052


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189516.p1 GENE.R_Transcript_189516~~R_Transcript_189516.p1 ORF type:complete len:695 (+),score=188.07,Peptidase_M41|PF01434.14|7.5e-74,AAA|PF00004.25|1e+04,AAA|PF00004.25|4.2e-45 R_Transcript_189516:171-2255(+)
ATGGCTACCTCATCACCATGCCTTGTTGGACATGGGTCATCGACCTGCAGCACCAAAACTATTTCAAATGAGAAACTTTTTCTTAGGCACCAATCTGCAGCTCCAGCAAGGATACTGTCGCCAAGGTATCAAAAGGCATTTATTATCAAAGCATCTATGGACCGGGCACAAAATCAAGGAAGAAGAGATGTCTTAAAATTGCTGCTTGGCAATGTGGGACTTGCATCTACATTAATGGGTGGCAGAAATGCTTATGCTGATGATCAAGGAGTATCTTCTTCAAGGATGTCTTACTCAAGGTTTCTGGAGTATCTAGATAAGGACAGGGTGAAAAAGGTAGATTTATTTGAAAATGGAACCATAGCTATTGTGGAGGCGATCTCTCCTGAGTTAGGTAACCGTGTGCAACGGGTTCGTGTTCAACTTCCAGGACTCAGCCAGGAGCTTCTGCAGAAGCTCAGGGAAAAGAACATTGACTTTGCAGCACACAATGCGCAAGAGGATTCTGGTTCGCTGCTGTTTAACTTGATAGGAAATCTTGCTTTTCCTCTAATCCTAATTGGAGGACTTTTCCTTCTTTCAAGACGCACTTCTGGAGGAATGGGTGGTCCTGGTGGCCCTGGCTTTCCCCTAGCTTTTGGCCAATCAAAAGCCAAGTTTCAGATGGAGCCTAATACTGGTGTGACCTTTGATGATGTTGCTGGTGTTGATGAAGCAAAGCAGGATTTCATGGAAGTGGTTGAGTTTCTGAAAAAACCAGAGAGGTTCACTGCTGTTGGGGCTCGTATACCCAAAGGTGTTCTTCTTGTTGGCCCTCCAGGTACCGGAAAGACGTTGCTGGCTAAGGCTATTGCTGGGGAAGCTGGTGTTCCATTTTTCTCAATTTCTGGTTCAGAGTTTGTTGAGATGTTTGTTGGTGTGGGTGCGTCTCGAGTGCGTGATCTTTTCAAAAAGGCAAAGGAAAATGCACCTTGCATTGTCTTTGTTGATGAAATTGATGCAGTGGGTAGGCAAAGAGGAACTGGAATTGGTGGAGGGAACGACGAAAGAGAACAGACCTTGAATCAGCTTCTGACTGAGATGGATGGCTTTGAGGGAAACACTGGCATTATTGTAGTAGCAGCGACTAACAGAGCTGACATTCTTGACTCGGCCTTGCTGAGGCCAGGACGCTTTGACAGACAGGTAACAGTAGATGTTCCAGACGTAAGAGGAAGGACGGAGATCTTGAAGGTTCATGGAAGCAATAAGAAATTTGATTCTGATGTTTCCCTTGACGTGATAGCAATGAGAACACCTGGTTTTAGTGGAGCTGATCTTGCAAACCTGTTAAATGAGGCAGCTATTTTGGCTGGTCGTCGTGGGAAGACAGGAATTTCTTCTAAAGAGATAGATGATTCAATTGATAGGATTGTAGCTGGAATGGAGGGTACAGTGATGACGGACGGTAAAAGTAAAAGCCTTGTGGCATATCATGAAGTGGGGCATGCCATTTGTGGGACTTTGACCCCAGGACACGACCCTGTTCAAAAAGTCACTCTTGTTCCACGTGGTCAGGCACGAGGACTGACATGGTTTATTCCAAATGAGGATCCAACTCTCATCTCAAAGCAGGCACTCTTTGCAAGAATCGTCGGTGGTCTTGGCGGCAGAGCTGCCGAGGAAGTGATATTTGGTGAGCCTGAAGTCACCACCGGAGCTGCTGGTGATTTGCAGCAAATCACTGGTTTGGCAAAGCAGATGGTGACAACTTTCGGGATGTCAGAGATCGGTCCCTGGTCTCTTATGGATGCATCAGCACAGAGTGGTGACGTTATCATGAGAATGATGGCGAGAAACTCAATGTCAGAAAAACTTGCTGAAGATATTGATGCAGCTGTCAAGAGACTTTCTGATGACGCTTATCAGATCGCCTTGAGTCACATAAGAAACAACCGCGAAGCCATGGACAAGATTGTCGAGGTTCTTTTGGAAAAGGAAACGATGTCAGGGGACGAGTTCCGAGCACTTTTTTCCGAGTTTGCTGAAATTCCTGCTGAAAACCGTGTACCTCCTGCTGTTGCATCTCCTCCTGTTGCCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189516.p1 GENE.R_Transcript_189516~~R_Transcript_189516.p1 ORF type:complete len:695 (+),score=188.07,Peptidase_M41|PF01434.14|7.5e-74,AAA|PF00004.25|1e+04,AAA|PF00004.25|4.2e-45 R_Transcript_189516:171-2255(+)
MATSSPCLVGHGSSTCSTKTISNEKLFLRHQSAAPARILSPRYQKAFIIKASMDRAQNQGRRDVLKLLLGNVGLASTLMGGRNAYADDQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKLREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRTSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVTVDVPDVRGRTEILKVHGSNKKFDSDVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKTGISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPNEDPTLISKQALFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDASAQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDDAYQIALSHIRNNREAMDKIVEVLLEKETMSGDEFRALFSEFAEIPAENRVPPAVASPPVAV*

Click here to download the sequence:
Link to NCBI Protein BLAST