Transcript Information: R_Transcript_189579.p1


Annotated TAIR IDAT5G04360.1
Annotated Gene Namelimit dextrinase
Annotated Gene Symbol(s)ATPU1, ATLDA, PU1, LDA
Annotation TypeOrtholog
Chromosome Positionchr5:1221566-1228399 | Forward length=965
E-Value7.3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52907133202083
Replicate 20.40572561190914
Replicate 30.16599085214603
Condition 2: 8 Hour
Replicate 10.059144601321848
Replicate 20.48610612698229
Replicate 30.39460023087798
Condition 3: 24 Hour
Replicate 10.49908276581965
Replicate 20.31964143319677
Replicate 30.84590163041149


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189579.p1 GENE.R_Transcript_189579~~R_Transcript_189579.p1 ORF type:complete len:414 (+),score=63.40,CBM_48|PF02922.14|9.1e-13 R_Transcript_189579:43-1284(+)
ATGTCACTATTTAAACCCACCTTCAACGGCTATGTCTACCCAGTTTATCACAATAACAACAACACTACTCTTCCATATTTGCCCTTCAATTTCAGCTTAATTACTAAATCCCAGTTGTTCAGTTCCATCTACATTGGGTCTAAACCCTTCACTTTCAAAAGATCCTCCTCCTCATCAACTGTTTCTATGGCTCTTGAAACTGATTTGGGTTCTTCAGTTACCCAGGATGGATTGCAGGGGAGTTTGTCTAAATCCAGAGCATTTTGGCCAAGCAAATCTGTCATTGCCTGGAATATTGACATTGGAAATGGTTCCTCCTACTTTTATGCAAGTAAAACTGCTACACTAACTGTTACGGATGCTGGGATACAGGGTCATGATGTGAAAATAAAGCTCGAAAAGGATGGAGGACTTCCAGAAAATGTTGTCAAGAAATTTCCTCACATCAGAGGTTATACAGCCTTCAAAGCTCCTTCAACACTGGATGTCAAAAGTCTCCTGAAGTGTCAATTGGCAGTTGCATCTTTCAGTTCTGACGGAGTTTGCAGAAATGCTACTGGTTTGCAGCTACCTGGTGTGATTGATGATCTATATTCATATGATGGCCCTTTGGGTGCTGTGTTCTCGGAGAACTCAATATCACTATACCTGTGGGCTCCTACTGCTCAAGCCGTGAGCGCCAGTATTTTTAGGAACCCATCAGGAGATGAGCCCTTGGAAACTGTACAGCTTAAAGAGTCAAATGGTGTCTGGAGTGCTGTCGGGACAAGAAGCTGGGAGGGGTGTTACTATGTGTACGAAGTCACTGTTTACCACCCCAGTACAATGAAGATTGAAAAATGCATTGCTACTGATCCCTATGCGAGAGGGATATCAGCTAATGGAATCCGGACATTATTTGTTGACTTAAACTCTGATTCTTTAAAGCCTGAAGGATGGGAAAAATTGGCTGATGAGAAGCCCATTCTTCCTTCTTTATCTGACATCAGTGTGTACGAACTGCATATAAGAGATTTCAGTGCAAATGATCCTACTGTGCATCCTGACCTTCGTGGCGGATATTTAGCTTTTACATCACAGATACTAAGGTGCTGGAATCACTACCACCTGATTCAGAAGAGCAACAAGCTCAAATTACTGCCATCCGAGATGAGGATGGGTTTAACTGGGGGTATAATCCTGTTTTGTGGGGGACCCCGAAGGGAAGTTATGCCACAGACCCCAATGGTCCATGTTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189579.p1 GENE.R_Transcript_189579~~R_Transcript_189579.p1 ORF type:complete len:414 (+),score=63.40,CBM_48|PF02922.14|9.1e-13 R_Transcript_189579:43-1284(+)
MSLFKPTFNGYVYPVYHNNNNTTLPYLPFNFSLITKSQLFSSIYIGSKPFTFKRSSSSSTVSMALETDLGSSVTQDGLQGSLSKSRAFWPSKSVIAWNIDIGNGSSYFYASKTATLTVTDAGIQGHDVKIKLEKDGGLPENVVKKFPHIRGYTAFKAPSTLDVKSLLKCQLAVASFSSDGVCRNATGLQLPGVIDDLYSYDGPLGAVFSENSISLYLWAPTAQAVSASIFRNPSGDEPLETVQLKESNGVWSAVGTRSWEGCYYVYEVTVYHPSTMKIEKCIATDPYARGISANGIRTLFVDLNSDSLKPEGWEKLADEKPILPSLSDISVYELHIRDFSANDPTVHPDLRGGYLAFTSQILRCWNHYHLIQKSNKLKLLPSEMRMGLTGGIILFCGGPRREVMPQTPMVHVV*

Click here to download the sequence:
Link to NCBI Protein BLAST