Transcript Information: R_Transcript_189584.p1


Annotated TAIR IDAT5G04360.1
Annotated Gene Namelimit dextrinase
Annotated Gene Symbol(s)ATPU1, ATLDA, PU1, LDA
Annotation TypeOrtholog
Chromosome Positionchr5:1221566-1228399 | Forward length=965
E-Value3E-254
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2991599368057
Replicate 22.3925057448827
Replicate 32.8802184796734
Condition 2: 8 Hour
Replicate 12.0204446518356
Replicate 21.9329642456035
Replicate 32.6389374968736
Condition 3: 24 Hour
Replicate 13.4729885197116
Replicate 22.2531895133792
Replicate 32.8380913739395


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189584.p1 GENE.R_Transcript_189584~~R_Transcript_189584.p1 ORF type:internal len:509 (+),score=94.80,CBM_48|PF02922.14|1.3e-12,Alpha-amylase|PF00128.20|0.011,Alpha-amylase|PF00128.20|0.022 R_Transcript_189584:1-1524(+)
TCTGGTTTTTCTAAATTTTGTTTGATTTGTTATTTTTTTCGATGGTGGATCAGATTAAGCTTGAGGTGGGATTGGGGTAGAGGATGTGATGTAGGTCAAGATGTGAAAATAAAGCTCGAAAAGGATGGAGGACTTCCCGAAAATGTTGTTGAGAAATTTCCTCACATTAGAGGTTATACAGCCTTCAAAGCTCCTTCAACACTGGATGTCAAAAGTCTCCTGAAGTGTCAATTGGCAGTTGCATCTTTCAGTTCTGACGGAGTTTGCAGAAATGCTACTGGTTTGCAGCTACCTGGTGTGATTGATGATCTATATTCATATGATGGCCCTTTGGGTGCTGTGTTCTCGGAGAACTCAATATCACTATACCTGTGGGCTCCTACTGCTCAAGCCGTGAGCGCCAGTATTTTTAGGAACCCATCAGGAGATGAGCCCTTGGAAACTGTACAGCTTAAAGAGTCAAATGGTGTCTGGAGTGCTGTCGGGACAAGAAGCTGGGAGGGGTGTTACTATGTGTACGAAGTCACTGTTTACCACCCCAGTACAATGAAGATTGAAAAATGCATTGCTACTGATCCCTATGCGAGAGGGATATCAGCTAATGGAATCCGGACATTATTTGTTGACTTAAACTCTGATTCTTTAAAGCCTGAAGGATGGGAAAAATTGGCTGATGAGAAGCCCATTCTTCCTTCTTTATCTGACATCAGTGTGTACGAACTGCATATAAGAGATTTCAGTGCAAATGATCCTACTGTGCATCCTGACCTTCGTGGCGGATATTTAGCTTTTACATCACAGGATTCAGCTGGTATTCTTCATCTGAAGAAGTTATCTGGTTCTGGTCTTACTCATGTGCATCTGTTACCGAGCTTCCATTTTGCTGAAGTTGATGATGACAAACAGAAATGGAAATCTGTCGATACTAAGGTGCTGGAATCACTACCACCTGATTCAGAAGAGCAACAAGCTCAAATTACTGCCATCCGAGATGAGGATGGGTTTAACTGGGGGTATAATCCTGTTTTGTGGGGGACCCCGAAGGGAAGTTATGCCACAGACCCCAATGGTCCATGTTGTATAATTGAGTTCAGAAAGATGGTTCAGGCACTAAATCGTATCGGCCTTCGTGTTGTACTGGATGTTGTGTATAACCACTTAAGTAGCAGTGGGCCATTTGGTGAGAATTCTGTCCTTGACAAGATTGTTCCAGGTTACTATCTAAGAAGGGATGCAGATGGTGTTATTGAGAATAGCACATGTATGAATAACACTGCTAGCGAACATTACATGGTTGAACGACTTATTGTGGATGATCTTCTATCTTGGGTAGTCAATTACAAGGTTGATGGATTCAGATTTGATCTTATGGGGCACATTATGAAACATACTATGGTGAAGGCAAAAAGCTTGATTGAAAGCTTCTCAAAAGCCAGAGATGGGGTGGAGGGTTTGAGCATCTATTTATATGGCGAAGGATGGGACTTTGGTGAGGTTGCCCAAAATGCACGTGGGGTAAATGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189584.p1 GENE.R_Transcript_189584~~R_Transcript_189584.p1 ORF type:internal len:509 (+),score=94.80,CBM_48|PF02922.14|1.3e-12,Alpha-amylase|PF00128.20|0.011,Alpha-amylase|PF00128.20|0.022 R_Transcript_189584:1-1524(+)
SGFSKFCLICYFFRWWIRLSLRWDWGRGCDVGQDVKIKLEKDGGLPENVVEKFPHIRGYTAFKAPSTLDVKSLLKCQLAVASFSSDGVCRNATGLQLPGVIDDLYSYDGPLGAVFSENSISLYLWAPTAQAVSASIFRNPSGDEPLETVQLKESNGVWSAVGTRSWEGCYYVYEVTVYHPSTMKIEKCIATDPYARGISANGIRTLFVDLNSDSLKPEGWEKLADEKPILPSLSDISVYELHIRDFSANDPTVHPDLRGGYLAFTSQDSAGILHLKKLSGSGLTHVHLLPSFHFAEVDDDKQKWKSVDTKVLESLPPDSEEQQAQITAIRDEDGFNWGYNPVLWGTPKGSYATDPNGPCCIIEFRKMVQALNRIGLRVVLDVVYNHLSSSGPFGENSVLDKIVPGYYLRRDADGVIENSTCMNNTASEHYMVERLIVDDLLSWVVNYKVDGFRFDLMGHIMKHTMVKAKSLIESFSKARDGVEGLSIYLYGEGWDFGEVAQNARGVNA

Click here to download the sequence:
Link to NCBI Protein BLAST