Transcript Information: R_Transcript_189640.p1


Annotated TAIR IDAT3G19840.1
Annotated Gene Namepre-mRNA-processing protein 40C
Annotated Gene Symbol(s)ATPRP40C, PRP40C
Annotation TypeHomolog
Chromosome Positionchr3:6891228-6897227 | Forward length=835
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9732930761858
Replicate 21.1349351576377
Replicate 30.77387627014029
Condition 2: 8 Hour
Replicate 10.82722516713666
Replicate 20.90652223680482
Replicate 31.1038141593479
Condition 3: 24 Hour
Replicate 11.7063235101672
Replicate 20.74511009765464
Replicate 32.0704585514633


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189640.p1 GENE.R_Transcript_189640~~R_Transcript_189640.p1 ORF type:internal len:148 (+),score=37.18 R_Transcript_189640:3-443(+)
GATGCAGGTGCAGTGTCTTCATCTGGATTTCATACTACCGAAAATCCTCCACCAACTGTTTCACCCACATCTAATTTCAGCCAAGCGGCAACTTCAACCTCGACTCCTCCTTTGTTTGCATCAGTTCCTGGGTTGCCAGGGCTGGCTGCTTCACCTGCAGTCTCATCTGTGGCAATGAGTTCTTTATCTCCTGCAGGTTTTAGACCTGCTATGCCAGGACCTCCTCTTCCTTCTAACCTTGGTGTTCAACCACAATTATATCCTCCTCTGTACCCGACTATACCTCCTTCGTCTGGTGCGCCACCTCAAGTACCTTGGTTGCCACCCCCACAAATGGGTGGGACTGGGTTGAGACCTTTCATGACATATCCTCCCGTTTATCCTGGTCCTTTGGGTTTGGCACCACGTGGCGTGTCCCTTCCTTCTGTTCCTTTGCCTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189640.p1 GENE.R_Transcript_189640~~R_Transcript_189640.p1 ORF type:internal len:148 (+),score=37.18 R_Transcript_189640:3-443(+)
DAGAVSSSGFHTTENPPPTVSPTSNFSQAATSTSTPPLFASVPGLPGLAASPAVSSVAMSSLSPAGFRPAMPGPPLPSNLGVQPQLYPPLYPTIPPSSGAPPQVPWLPPPQMGGTGLRPFMTYPPVYPGPLGLAPRGVSLPSVPLPE

Click here to download the sequence:
Link to NCBI Protein BLAST