Transcript Information: R_Transcript_189696.p5


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29922886811014
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.36657183346206
Replicate 30.29756738721946
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17940741546637


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189696.p5 GENE.R_Transcript_189696~~R_Transcript_189696.p5 ORF type:complete len:122 (+),score=11.21,RVT_1|PF00078.23|1.2e-19 R_Transcript_189696:6022-6387(+)
ATGTGTCATGAGTTAGTAAAAGGTTACACCAAAAAACATATCTCCCCTAGGAGTATGATTAAAGTAGACCTCCAAAAGACCTATGATAGTATGGAATGGCCTTTTATTTACCAAATACTTGTGGAACTGGGATTTCCTGCTCAGTTCATTGCTTGGGTGATGCAATGTCTTACTACTGTGTCCTATTCTATTTTAATTAATGGTGAACTAACTCCTCATTTTGAAGCAAAGAAAGGACTTAGGCAAGGGGATCCACTTTCTCCCTATCTATTTGTGATGGCTATGGAATATCTCAGTAGATGCTTAAAAGAGGTGACTGGTAACCTTGATTTAATTTTCATCCAAAATATGCTCGACAAGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189696.p5 GENE.R_Transcript_189696~~R_Transcript_189696.p5 ORF type:complete len:122 (+),score=11.21,RVT_1|PF00078.23|1.2e-19 R_Transcript_189696:6022-6387(+)
MCHELVKGYTKKHISPRSMIKVDLQKTYDSMEWPFIYQILVELGFPAQFIAWVMQCLTTVSYSILINGELTPHFEAKKGLRQGDPLSPYLFVMAMEYLSRCLKEVTGNLDLIFIQNMLDKG*

Click here to download the sequence:
Link to NCBI Protein BLAST