Transcript Information: R_Transcript_189697.p2


Annotated TAIR IDAT1G33710.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12219657-12220289 | Forward length=210
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0221658134642
Replicate 21.5957188316386
Replicate 31.1911503549999
Condition 2: 8 Hour
Replicate 10.97943459788981
Replicate 21.0733223283769
Replicate 30.94388375226012
Condition 3: 24 Hour
Replicate 12.2039494938596
Replicate 20.79398932006078
Replicate 31.3132622812138


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189697.p2 GENE.R_Transcript_189697~~R_Transcript_189697.p2 ORF type:complete len:250 (+),score=32.11,zf-RVT|PF13966.2|1.6e+03,zf-RVT|PF13966.2|2.3e-12,zf-RVT|PF13966.2|5.8e+03 R_Transcript_189697:6921-7670(+)
ATGAACCTGTTGAATTGGAACCAAGCTGCTGTCTGCAAGCTTTGCTGGGAGCTCAATAAAAAGAAAGATAAAATGTGGATCAAATGGCTCCATGGATATTATCCAGGGGTCAATCAAGGTAGACGAATTCCCAATGAACTGTCGTGCATGCTGAAAAAAATAGTGGAAATGAGAAATACGATTGATGGACTGCAAATCCTTTTGCTACCAGATCATATCACCATCAAATACTTCTATGATCAGCTGCTGCCAAGCCAACCAAAAGTTGAGTGGTATCATCTTGTTTGGAAGAGTTTTGCCAGGCCTAAGGCTAAATTCATTTTGTGGCTGATGGTGAAGCAAAAACTGACTAAAGACAGAGTGCTTACTTGGAATTCTCAGATTGATCATCTTTGTCCACTATATCAAAGCAAGCCTGAAAGTTGTGATCACTTGCTTACATACTGTAAGTTTGTTCATACAGTGATAGAGCAAGTCACAGGGAAGTTTGGTGCGAGCTGGAGCACAGCAAGTAGCTGGCAGGGAACTATGGAGACCTGGAAGAAGTTGTGTAAAGGTAAAAGTCCAAGACCTCAATGTCTAAAAGCAGTTTTGGCAGAAGCTTGGTATAGCCTATGGTGGGAGAGGAATTCCAAAATTTTCATGCATAAAGATAGTTTGCCACAGAGAATAGCAAATGAAATCATTTATCATGTATGTGCTAGAGGATTTGATAATTGTAAAGTGGCAAACTATCTGTACAAGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189697.p2 GENE.R_Transcript_189697~~R_Transcript_189697.p2 ORF type:complete len:250 (+),score=32.11,zf-RVT|PF13966.2|1.6e+03,zf-RVT|PF13966.2|2.3e-12,zf-RVT|PF13966.2|5.8e+03 R_Transcript_189697:6921-7670(+)
MNLLNWNQAAVCKLCWELNKKKDKMWIKWLHGYYPGVNQGRRIPNELSCMLKKIVEMRNTIDGLQILLLPDHITIKYFYDQLLPSQPKVEWYHLVWKSFARPKAKFILWLMVKQKLTKDRVLTWNSQIDHLCPLYQSKPESCDHLLTYCKFVHTVIEQVTGKFGASWSTASSWQGTMETWKKLCKGKSPRPQCLKAVLAEAWYSLWWERNSKIFMHKDSLPQRIANEIIYHVCARGFDNCKVANYLYKL*

Click here to download the sequence:
Link to NCBI Protein BLAST