Transcript Information: R_Transcript_189740.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63378336648329
Replicate 20.58323056711939
Replicate 30.79537283319974
Condition 2: 8 Hour
Replicate 10.51012218640094
Replicate 20.3105678033498
Replicate 30.50421140612186
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.30399589842913


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189740.p1 GENE.R_Transcript_189740~~R_Transcript_189740.p1 ORF type:internal len:144 (+),score=17.25,zf-RVT|PF13966.2|8.7e-14,zf-RVT|PF13966.2|2.2e+03 R_Transcript_189740:1-429(+)
TGGAAGGCAAAGGTCCCTCTTATGGTGAGGGCTTTTTTTTGGACTTTAGCCTTGGAGAGGATTAACACCAATGATATGCGACAGCGAAGAAGGCCTTATGCTTGTCTTTCTCCGGATATTTGTTGTATGTGTAGGGAGAGTGGGGAGACTGCTTCTTATTTGTTTCTCCATTGCCCGGTTGTTCGGTTTTTGTGGGCTTCATTGTTTGGTGTGCGTGGAGAATCCTTGGTGTGTCCCTCCACCGTTTCGGAGTTCCTTCAGGTTCATTTCTTGGGGTTTGGTCGGAGTAAGAAGTTGAGTATGTTATGGCGTAATGCGGTTATTGCTATCCTGTGGTGTGTTTGGTTGGAGAGGAATGCTAGAGTATTTAAGCAGGTTGCTCATCCTCCTTCCCTCCTTTGGGAGCGCATTACTTTTTTAGCCTCCCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189740.p1 GENE.R_Transcript_189740~~R_Transcript_189740.p1 ORF type:internal len:144 (+),score=17.25,zf-RVT|PF13966.2|8.7e-14,zf-RVT|PF13966.2|2.2e+03 R_Transcript_189740:1-429(+)
WKAKVPLMVRAFFWTLALERINTNDMRQRRRPYACLSPDICCMCRESGETASYLFLHCPVVRFLWASLFGVRGESLVCPSTVSEFLQVHFLGFGRSKKLSMLWRNAVIAILWCVWLERNARVFKQVAHPPSLLWERITFLASL

Click here to download the sequence:
Link to NCBI Protein BLAST