Transcript Information: R_Transcript_189772.p2


Annotated TAIR IDAT1G06570.1
Annotated Gene Namephytoene desaturation 1
Annotated Gene Symbol(s)PDS1, HPD
Annotation TypeOrtholog
Chromosome Positionchr1:2012015-2013543 | Reverse length=473
E-Value9.5E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40382656979466
Replicate 20.092903984142912
Replicate 31.8244304280121
Condition 2: 8 Hour
Replicate 11.1917898868128
Replicate 22.5724908312868
Replicate 33.5339418906948
Condition 3: 24 Hour
Replicate 11.5237482673255
Replicate 20.87830676997874
Replicate 30.96848250826979


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189772.p2 GENE.R_Transcript_189772~~R_Transcript_189772.p2 ORF type:5prime_partial len:226 (-),score=-10.62 R_Transcript_189772:21-698(-)
AAATTCAGACCGGCACCGATTTCAAGCTGGTCGGTTTTTCCAACTTCGTCCGACTTAACCCCCGGTCAGACCGCTTCCCGGTCAAACGCTTCCACCACGTGGAATTCTGGTGCGGCGACTCCACCAACGTGTCCCGCCGGTTTTCCTGGGGACTCGGCATGCCGATTGTCGCCAAATCCGACCTCTCCACCGGCAACCCGGTGCACGCCTCTTACCTCCTCCGGTCCGGCGACCTCAACTTCCTCTTCACCTCCCCTTACTCCCAGTCTCACTCTCTCTCCTCCACGTCAGCAGCCACCATTCCAATCTTCAGTTTCTCTCTCCACTCCTCCTTCCTCTCCTCCCACGGCCTCGGGGTCCGCGCCGTGGCCCTTGAAGTCGACGATGCTGAAGCCGCCTTCCATGTCAGCGTCTCCCACGGGGCCCACCCCGTCTCCCCTCCAATCCACCTCTCCCAAGACGCCGCCGTTGTATCCGAAGTCCACCTCTACGGCGATGTCGTTTTGCGCTACATCAGCTACACCAACTCAAACCCTAGAAACCCTAGCGAGTGGTTTCTCCCTGGGTTTGACCCAATGCCTGAGGAATCCTCGTTCCAAGGCCTCGACTACGGAATCCGAAGACTCGACCACGCCGTGGGGAACGTCCCCGAACTGGGCCCCGCAATCGAGTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189772.p2 GENE.R_Transcript_189772~~R_Transcript_189772.p2 ORF type:5prime_partial len:226 (-),score=-10.62 R_Transcript_189772:21-698(-)
KFRPAPISSWSVFPTSSDLTPGQTASRSNASTTWNSGAATPPTCPAGFPGDSACRLSPNPTSPPATRCTPLTSSGPATSTSSSPPLTPSLTLSPPRQQPPFQSSVSLSTPPSSPPTASGSAPWPLKSTMLKPPSMSASPTGPTPSPLQSTSPKTPPLYPKSTSTAMSFCATSATPTQTLETLASGFSLGLTQCLRNPRSKASTTESEDSTTPWGTSPNWAPQSST*

Click here to download the sequence:
Link to NCBI Protein BLAST