Transcript Information: R_Transcript_189871.p1


Annotated TAIR IDATCG01280.1
Annotated Gene NameChloroplast Ycf2;ATPase, AAA type, core
Annotated Gene Symbol(s)YCF2.2
Annotation TypeOrtholog
Chromosome PositionchrC:145291-152175 | Reverse length=2294
E-Value3.8e-315
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48954301411123
Replicate 20.36200517959135
Replicate 30.35106111258471
Condition 2: 8 Hour
Replicate 10.51598565980785
Replicate 20.29985856875153
Replicate 30.66069080802175
Condition 3: 24 Hour
Replicate 10.48378520977921
Replicate 20.46476599194703
Replicate 30.67088749998153


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_189871.p1 GENE.R_Transcript_189871~~R_Transcript_189871.p1 ORF type:internal len:522 (-),score=-0.63,DUF825|PF05695.8|0 R_Transcript_189871:3-1565(-)
AGGGATCAAATAGGAAACGAGACTCTGAATCATAGAACTATAAGGAAATATACGATCAACCAACATTTATCGAATTTGAAAAAGAGTCAGAAGAAATGGTTCGATCCTCTTATTTTTATTTCTCGAACCGAGAGATTCATGAATCGGGATAGATACAAATGGTTCAATGGGAGCAAGAATTTCCAGGAACATTTGGAACAGTTCGTTTCTGAGCAGAAGAGCCGTTTTCAAGTAGTGTTTGATCGATTACGTCAATATTCGATTGATTGGTCTGAGGTTATCGCCAAAAAAGATTTGTCTAAGTCACTTCGTTTCTTTTTGTCCAAGTCACTTCTTTTTTTGTCCAAGTTGCTTCTCTTTTTGTCTAACTCACTTCCTTTTTTCTTTGTGAGTTTCGGGAATATCCCCATTCATAGGTCCGAGATCCACATTTATGAATTGAAAGGTCCGAATGATCAACTCTACAATCTGTTGTTAGAATCAATAGGTCTTCAAATCGTTCATTTGAAAAAATGGAAAGCCTTCTTATTCTTATTGGATGATCATGATACTTTTCAAAAATCGAAATTCTTGGGAGGAACAATATCACCATTTTTGTTCAATAAGATACCAAAGTGGATGATTGACTCATTCCATACTAGAAATAATCGCGGGAAATCCTTTGATAACACGGATTCCTATTTCTCAATGATATCCCACGATCAAAACAATTGGCTGAATCCCGTAAAACCATTTCATAGAAGTTCATTGATATCTTCTTTTTATAAAGCAAATCGACTTCGATTCTTGAATAATCCACATCACTTCTGCCTCTATTGTAACAAAAGGTTCCCTTTTTATATGGAAAAGGCCCGTATCAATAATTCTGATTTTACGTATAGACAATTCCTCAATATCTTGTTCATTCGCAACAAAATATTTTCTTTGTGTGTCGGTAAAAAAAAACATGCTTTTTTGGAGAGAGATACTATTTCACCAATCGAGTCACAGGTATCGAACATATTCATACCTAACGATTTTCCAATTCGATCCGATCTATCCGTTCGTAGAACTATTTACTCGATCGCAGACATTTCCGGAACACCTCTAACAGAGGGACAAATAGTCCATTTTGAAAGAACTTATTGTCAACCTCTTTCAGATATGAATCTATCTGATTCAGAAAGGAAGAACTTGCATCAGTATCTCAATTTCAATTCAAACATGGGTTTGATTTACACTCCATGTTCTGAGAAATATTTCCCATCGGAAAAGAGGAAAAAACAGAGTCTTTGTCTAAAGAAATGCGTTGAGAAAGGGCAGATGTATAGAACCTTTCGACGAGATAGTGTTTTTTCAACTCTCTCAAAATGGAATCTATTCCAAACATATATGCCATGGTTCCTTACTTCGACAGGGTACAAATATCTAAATTGGATATTTTTAGATACTTTTTCAGATCTATTGCCGATACTAAGTAGCAGTCAAAAATTTGTATCTATTTTTCATGATATTATGCACGGATCAGATATATCATGGCGAATTCTTCAGAAAAAATTGTGTCTTCCACAATGGAATCTGATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_189871.p1 GENE.R_Transcript_189871~~R_Transcript_189871.p1 ORF type:internal len:522 (-),score=-0.63,DUF825|PF05695.8|0 R_Transcript_189871:3-1565(-)
RDQIGNETLNHRTIRKYTINQHLSNLKKSQKKWFDPLIFISRTERFMNRDRYKWFNGSKNFQEHLEQFVSEQKSRFQVVFDRLRQYSIDWSEVIAKKDLSKSLRFFLSKSLLFLSKLLLFLSNSLPFFFVSFGNIPIHRSEIHIYELKGPNDQLYNLLLESIGLQIVHLKKWKAFLFLLDDHDTFQKSKFLGGTISPFLFNKIPKWMIDSFHTRNNRGKSFDNTDSYFSMISHDQNNWLNPVKPFHRSSLISSFYKANRLRFLNNPHHFCLYCNKRFPFYMEKARINNSDFTYRQFLNILFIRNKIFSLCVGKKKHAFLERDTISPIESQVSNIFIPNDFPIRSDLSVRRTIYSIADISGTPLTEGQIVHFERTYCQPLSDMNLSDSERKNLHQYLNFNSNMGLIYTPCSEKYFPSEKRKKQSLCLKKCVEKGQMYRTFRRDSVFSTLSKWNLFQTYMPWFLTSTGYKYLNWIFLDTFSDLLPILSSSQKFVSIFHDIMHGSDISWRILQKKLCLPQWNLI

Click here to download the sequence:
Link to NCBI Protein BLAST