Transcript Information: R_Transcript_18990.p1


Annotated TAIR IDAT5G47180.1
Annotated Gene NamePlant VAMP (vesicle-associated membrane protein) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19161384-19163265 | Reverse length=220
E-Value6.2E-97
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.369927024356
Replicate 264.889428441749
Replicate 372.570914367121
Condition 2: 8 Hour
Replicate 147.283049553301
Replicate 259.564762835572
Replicate 359.462172721957
Condition 3: 24 Hour
Replicate 157.98825446308
Replicate 258.370383443166
Replicate 360.191187888968


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18990.p1 GENE.R_Transcript_18990~~R_Transcript_18990.p1 ORF type:complete len:232 (+),score=48.04,Motile_Sperm|PF00635.22|1e-28,Motile_Sperm|PF00635.22|5.7e+03 R_Transcript_18990:280-975(+)
ATGGTAGCTACCATGACCATGACGACCACTACTAAACAGTTGATCTCTGTTCATCCTGAGGAGCTAAAGTTTGTTTTTGAGCTGGAGAAGCAAAGCTTTTGTGACCTGAAAGTTACAAACAACACAGAGCAAAATGTTGCATTTAAGGTCAAGACCACTTCACCTAAGAAGTACTTTGTTCGGCCCAATACTGGTGTTATACATCCCTGGGACTCATGTGTCATAAGAGTCACTCTCCAGGCTCAGAGGGAATACCCACCAGATATGCAGTGCAAGGATAAGTTTCTTCTTCAAAGTACAATTGTGTCACCCAATAGCGAAGTTGATGAACTTCCTCAAGACACTTTTAACAAAGACAGTGGAAGGGTTATTGAAGAATGCAAACTCAGGGTTGTATATGCTTCTCCATCAGCTCAGGGTAATTCTGATGATGACTCAGCAAACTCTGCAAGAGGTCTAAATGTTCATGACAATTTTAGTGTTGAAGATAATCAGGCTTTGCAGCGTGTGAGAGAGGAAAGGGATGCAGCTATCCGGCAAACACAGCAACTGCAACAGGAATTGGATGTGTTGAAGAGACGCAGACTGCGCAAAAATAACGCTGGTTTCTCGTTCAGATTTGCTCTTTTTGTGGCGATCATAGGGATTATGCTTGGCTTCCTCTTAAAACTTTCATTTTCTTCATCATCAACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18990.p1 GENE.R_Transcript_18990~~R_Transcript_18990.p1 ORF type:complete len:232 (+),score=48.04,Motile_Sperm|PF00635.22|1e-28,Motile_Sperm|PF00635.22|5.7e+03 R_Transcript_18990:280-975(+)
MVATMTMTTTTKQLISVHPEELKFVFELEKQSFCDLKVTNNTEQNVAFKVKTTSPKKYFVRPNTGVIHPWDSCVIRVTLQAQREYPPDMQCKDKFLLQSTIVSPNSEVDELPQDTFNKDSGRVIEECKLRVVYASPSAQGNSDDDSANSARGLNVHDNFSVEDNQALQRVREERDAAIRQTQQLQQELDVLKRRRLRKNNAGFSFRFALFVAIIGIMLGFLLKLSFSSSST*

Click here to download the sequence:
Link to NCBI Protein BLAST