Transcript Information: R_Transcript_19.p1


Annotated TAIR IDAT1G75560.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:28371420-28372717 | Reverse length=257
E-Value9E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.032159007686
Replicate 218.287100362582
Replicate 315.794565036057
Condition 2: 8 Hour
Replicate 120.240331912037
Replicate 225.0658272252
Replicate 324.080160863336
Condition 3: 24 Hour
Replicate 125.642389524492
Replicate 222.766718854789
Replicate 322.682016550535


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19.p1 GENE.R_Transcript_19~~R_Transcript_19.p1 ORF type:complete len:248 (+),score=19.50,zf-CCHC|PF00098.19|3.4e-06,zf-CCHC|PF00098.19|3.5e-06,zf-CCHC|PF00098.19|5e-05,zf-CCHC|PF00098.19|9.8e-07,zf-CCHC|PF00098.19|0.0013,zf-CCHC|PF00098.19|7.3e-05,zf-CCHC|PF00098.19|0.00048,zf-CCHC|PF00098.19|0.00075,zf-CCHC|PF00098.19|0.00033,zf-CCHC_3|PF13917.2|0.014,zf-CCHC_3|PF13917.2|0.51,zf-CCHC_3|PF13917.2|0.2,zf-CCHC_3|PF13917.2|0.092,zf-CCHC_3|PF13917.2|0.3,zf-CCHC_3|PF13917.2|0.38,zf-CCHC_3|PF13917.2|34,zf-CCHC_3|PF13917.2|0.0067,zf-CCHC_3|PF13917.2|0.04,zf-CCHC_2|PF13696.2|1.8e-05,zf-CCHC_2|PF13696.2|1,zf-CCHC_2|PF13696.2|60,zf-CCHC_2|PF13696.2|0.015,zf-CCHC_2|PF13696.2|0.14,zf-CCHC_2|PF13696.2|0.64,zf-CCHC_2|PF13696.2|0.051,zf-CCHC_2|PF13696.2|14,zf-CCHC_2|PF13696.2|5.8,zf-CCHC_4|PF14392.2|0.98,zf-CCHC_4|PF14392.2|0.58,zf-CCHC_4|PF14392.2|43,zf-CCHC_4|PF14392.2|0.0051,zf-CCHC_4|PF14392.2|2.3,zf-CCHC_4|PF14392.2|96,zf-CCHC_4|PF14392.2|0.016,zf-CCHC_4|PF14392.2|0.98,zf-CCHC_4|PF14392.2|0.95 R_Transcript_19:143-886(+)
ATGGATGCTGCTAACAGGGGTACAGGAGGTAGAGTATTCCGAAACAAGGAGCGGGCATCCTATGCACCATACCAAAAGGATCGTCGGAGTTTCAGGCAAAGTTATCTGTGCAAGAACTGCAAGCGCCCAGGTCATTTTGCCAGGGAGTGTCCAAACGACTCCGTGTGCAACAATTGTGGCCAAGCTGGGCACATGGCTGCTGACTGTAACTCGAAAACGATGTGTTGGAATTGCAAAGAACCAGGGCATCTGTCGACGGAATGCAAGAACCAGCCTATTTGTCACTCGTGTGGGAAGATGGGCCATTTAGCTCGTGAATGTCCGAAATCAAGCGATCCTAGAGTTTGCAGCAACTGTTTCCAACCAGGGCATTTGGCAGCAGACTGCATCAATGAAAAGGCATGTAACAAGTGCCGGAAGCCCGGCCACCTTGCTCGTGACTGTCTCAACGAACCCATTTGCAATATCTGCAACATTACAGGACATGTAGCCCGTCAATGTCCCAACTCCGCTCTTCCACCACCGTTTGCACCACCTCCTATGGTAGGGGGCCCACCCCCTCTTCCACCCCCAATGATTGGGGGCCCATATCCAGATATTTTCTGCCGGAGCTGTGGTCGTCCAGGTCATATAAGTCATCAGTGCATGTATATGGTCATGTGCAGCACCTGTGGTGGTCGTGGTCATCGTGCATTTGATTGCCCCTCTAGCCCGATGCTTGATATGGTCTATCGTCGGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19.p1 GENE.R_Transcript_19~~R_Transcript_19.p1 ORF type:complete len:248 (+),score=19.50,zf-CCHC|PF00098.19|3.4e-06,zf-CCHC|PF00098.19|3.5e-06,zf-CCHC|PF00098.19|5e-05,zf-CCHC|PF00098.19|9.8e-07,zf-CCHC|PF00098.19|0.0013,zf-CCHC|PF00098.19|7.3e-05,zf-CCHC|PF00098.19|0.00048,zf-CCHC|PF00098.19|0.00075,zf-CCHC|PF00098.19|0.00033,zf-CCHC_3|PF13917.2|0.014,zf-CCHC_3|PF13917.2|0.51,zf-CCHC_3|PF13917.2|0.2,zf-CCHC_3|PF13917.2|0.092,zf-CCHC_3|PF13917.2|0.3,zf-CCHC_3|PF13917.2|0.38,zf-CCHC_3|PF13917.2|34,zf-CCHC_3|PF13917.2|0.0067,zf-CCHC_3|PF13917.2|0.04,zf-CCHC_2|PF13696.2|1.8e-05,zf-CCHC_2|PF13696.2|1,zf-CCHC_2|PF13696.2|60,zf-CCHC_2|PF13696.2|0.015,zf-CCHC_2|PF13696.2|0.14,zf-CCHC_2|PF13696.2|0.64,zf-CCHC_2|PF13696.2|0.051,zf-CCHC_2|PF13696.2|14,zf-CCHC_2|PF13696.2|5.8,zf-CCHC_4|PF14392.2|0.98,zf-CCHC_4|PF14392.2|0.58,zf-CCHC_4|PF14392.2|43,zf-CCHC_4|PF14392.2|0.0051,zf-CCHC_4|PF14392.2|2.3,zf-CCHC_4|PF14392.2|96,zf-CCHC_4|PF14392.2|0.016,zf-CCHC_4|PF14392.2|0.98,zf-CCHC_4|PF14392.2|0.95 R_Transcript_19:143-886(+)
MDAANRGTGGRVFRNKERASYAPYQKDRRSFRQSYLCKNCKRPGHFARECPNDSVCNNCGQAGHMAADCNSKTMCWNCKEPGHLSTECKNQPICHSCGKMGHLARECPKSSDPRVCSNCFQPGHLAADCINEKACNKCRKPGHLARDCLNEPICNICNITGHVARQCPNSALPPPFAPPPMVGGPPPLPPPMIGGPYPDIFCRSCGRPGHISHQCMYMVMCSTCGGRGHRAFDCPSSPMLDMVYRRY*

Click here to download the sequence:
Link to NCBI Protein BLAST