Transcript Information: R_Transcript_190079.p1


Annotated TAIR IDAT2G40260.1
Annotated Gene NameHomeodomain-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16816818-16818473 | Reverse length=410
E-Value5.7E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.90138078788734
Replicate 20.72579803908191
Replicate 30.84839768874639
Condition 2: 8 Hour
Replicate 10.78596603534367
Replicate 21.2146651864348
Replicate 31.2101073746925
Condition 3: 24 Hour
Replicate 10.22674377508844
Replicate 20.59903172295395
Replicate 30.48639343748661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_190079.p1 GENE.R_Transcript_190079~~R_Transcript_190079.p1 ORF type:5prime_partial len:405 (+),score=86.83,Myb_DNA-binding|PF00249.27|5.4e-09 R_Transcript_190079:3-1217(+)
GAGAGAGAGACAGATCACAAAATGATTAAAGCAGCTGGAAGTAGTGCTGGTAGTGGTAGCACACAAGGATCCAAAACAAGCCTTTATGATGATGACCAATTAATAGGATCAAGAGAAGAAGGAGAGGAGGTTGATGACAGCAGCAACAAGCAGCAGCAGCAGCTCATCAATAATAATCATGGCATCCTTGGGGCTAGCTCCAGCAACAGCACCGTCGACGAGAACGACAAGAAGGGCGGCGGCGGCCCCTCCTCGGGATCCGTCAGGCCCTACAACCGCTCCAAGATGCCCCGCCTCCGCTGGACTCCCGATCTCCACCTTTGCTTTGTTCATGCTGTTGAGAGGCTTGGAGGCCAAGACAGAGCAACACCTAAGTTGGTTCTTCAATTGATGAATGTCAAAGGCCTAAGTATCGCTCATGTCAAGAGTCATCTTCAGATGTATCGGAGCAAAAAGACTGATGAATCCAAGCAAGCTATGAGCAATGAAGGGCTATTTAGTGATGAGAGGGATCATATCTTCAACCTAAGTCAGCTGCCAATGTTACAAGGCTACAATCATCAAAGACCACCTTTCAATCTAAGATATGGTGATTCTTCCTGGAGATCAGGCCTAGCCAACCAGATTTACACTCCTTACAATATTGGAACATCATCTGAGAGGCCAAGAAATGGGCTGAATATCAGTTCCATAGCAGAAAGAATATCCTCAAGTAGCCATAATTCCTTCCAAGGACAATTATCAAATTGGAGAACCAATCAAACACTACAACAAAAGACCCCTCATCAATCTCAAAGTGATCAAATTGGAGCATATAGATCAACGATACGAGCGAGATCCACTAACAATCTAGCAAGCCAAATACAAGAAGCAGCTCATGAAGCAAGAGAAAGATCATTGAATTCTTTTAACTTGCTTAAACAATCCTCCAGCATTGAGAATAATGTGATCCAAACGGCGTCGTCTTCGTCTCAGGTGAAAAGGAAAGCCTTGGATTTAGATCTCTCTCTTGCCCTAGCTCCCAAAAATGTAGTAGATGATAATACAACCAAACAATTAAGTGTAAAGGATAAAGAGGGAATTAATAGTGAATTATCACTCTCATTACAATATCCTCCACCACCAGCAGATGAGTTGATTGGCAAGTTGAAGAAGGTAAGATCAGAAGCAAGTAGTAGGAAGCATGCAAGGACAAGCCTTGATCTGACTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_190079.p1 GENE.R_Transcript_190079~~R_Transcript_190079.p1 ORF type:5prime_partial len:405 (+),score=86.83,Myb_DNA-binding|PF00249.27|5.4e-09 R_Transcript_190079:3-1217(+)
ERETDHKMIKAAGSSAGSGSTQGSKTSLYDDDQLIGSREEGEEVDDSSNKQQQQLINNNHGILGASSSNSTVDENDKKGGGGPSSGSVRPYNRSKMPRLRWTPDLHLCFVHAVERLGGQDRATPKLVLQLMNVKGLSIAHVKSHLQMYRSKKTDESKQAMSNEGLFSDERDHIFNLSQLPMLQGYNHQRPPFNLRYGDSSWRSGLANQIYTPYNIGTSSERPRNGLNISSIAERISSSSHNSFQGQLSNWRTNQTLQQKTPHQSQSDQIGAYRSTIRARSTNNLASQIQEAAHEARERSLNSFNLLKQSSSIENNVIQTASSSSQVKRKALDLDLSLALAPKNVVDDNTTKQLSVKDKEGINSELSLSLQYPPPPADELIGKLKKVRSEASSRKHARTSLDLTL*

Click here to download the sequence:
Link to NCBI Protein BLAST