Transcript Information: R_Transcript_19020.p1


Annotated TAIR IDAT3G24320.1
Annotated Gene NameMUTL protein Homolog 1
Annotated Gene Symbol(s)MSH1, CHM1, ATMSH1, CHM
Annotation TypeOrtholog
Chromosome Positionchr3:8823229-8829571 | Reverse length=1118
E-Value7.8E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87514196358241
Replicate 20.86286166094376
Replicate 30.15689546298734
Condition 2: 8 Hour
Replicate 10.50313421124476
Replicate 20.45947017481888
Replicate 30.12432610013964
Condition 3: 24 Hour
Replicate 10.6289810199371
Replicate 20.3021268341175
Replicate 30.29983157105339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_19020.p1 GENE.R_Transcript_19020~~R_Transcript_19020.p1 ORF type:5prime_partial len:146 (-),score=31.21,MutS_V|PF00488.17|1.7e-19 R_Transcript_19020:195-632(-)
CCCATTTGCTCTCCAATGCTCTGTTCCCTGAATTTATTCTTACTTGATTTTGTGTATCAAAAATTTCAGATAGAGATGTCAGAGATTCGTTCACTACTATCTGCAACCACATCAAGAAGTCTTGTTCTTATTGATGAAATCTGTCGAGGAACAGAAACAGCCAAGGGAACATGTATTGCTGGGAGTATTGTTGAAACTCTGGATGCAGTTGGCTGTTTGGGTATTGTATCAACTCACTTGCATGGGATATTTGATTTACCACTGAGGACAAAGAAAACTGTTTACAAGGCAATGAACACAGAATTTGTTGATGGCCAAACTGTCCCAACTTGGAAGTTGACAGATGGAATCTGTAGAGAAAGCCTTGCATTTGAAACTGCCAAGAGAGAAGGTCTATCTGTTCTAACATCAACTTGGTTGCACAAATTGAGATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_19020.p1 GENE.R_Transcript_19020~~R_Transcript_19020.p1 ORF type:5prime_partial len:146 (-),score=31.21,MutS_V|PF00488.17|1.7e-19 R_Transcript_19020:195-632(-)
PICSPMLCSLNLFLLDFVYQKFQIEMSEIRSLLSATTSRSLVLIDEICRGTETAKGTCIAGSIVETLDAVGCLGIVSTHLHGIFDLPLRTKKTVYKAMNTEFVDGQTVPTWKLTDGICRESLAFETAKREGLSVLTSTWLHKLRS*

Click here to download the sequence:
Link to NCBI Protein BLAST